GrainGenes QTL Report: QLr.locus-3A.1

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QTL

QLr.locus-3A.1

Trait Affected

Reaction to leaf rust

Synonym

QLr.WorldDurum-3A.1

QTL0014_LR-Aoun_et_al__2016

Ontology

TO:0000439	Planteome	fungal disease resistance
TO:0020057	Planteome	wheat leaf rust disease resistance
TO:0020056	Planteome	barley leaf rust disease resistance
TO:0020057	Planteome	wheat leaf rust disease resistance

Gene Class

Reaction to Puccinia triticina Erikss.

Map

Durum Wheat, NSGC Lr 3A

Map Data

Durum Wheat, NSGC Lr

Chromosome

3AS

Nearest Marker

IWA8624

LOD Peak Height

5.12

Phenotypic R2

0.0594

Species

Triticum turgidum ssp. durum

Comment

Associated with adult plant resistance to Pt race BBBQJ in Ciudad Obregon, Mexico field.

Curator Note (VCB, 04/2019). QTL names and markers associated with this QTL are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate this QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.

Environment

Ciudad Obregon, Mexico Field 2013

Reference

Aoun M et al. (2016) Genome-Wide Association Mapping of Leaf Rust Response in a Durum Wheat Worldwide Germplasm Collection The Plant Genome 9.


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