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GrainGenes QTL Report: QLr.locus-3A.2

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QTL
QLr.locus-3A.2
Browser
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Trait Affected
Reaction to leaf rust
Synonym
QLr.WorldDurum-3A.2
QTL0015_LR-Aoun_et_al__2016
QLr.WorldDurum-3A.3
QTL0016_LR-Aoun_et_al__2016
Ontology
TO:0000439Planteomefungal disease resistance
TO:0020057Planteomewheat leaf rust disease resistance
TO:0020056Planteomebarley leaf rust disease resistance
TO:0020057Planteomewheat leaf rust disease resistance
Gene Class
Reaction to Puccinia triticina Erikss.
Map
Durum Wheat, NSGC Lr 3A
Map Data
Durum Wheat, NSGC Lr
Chromosome
3AL
Nearest Marker
IWA1536
Positive Significant Marker
IWA3512
[ Show all 7 ]
LOD Peak Height
3.77
Phenotypic R2
0.0367
Species
Triticum turgidum ssp. durum
Comment
Associated with adult plant resistance to a mixture of six Pt races (MHDSB, MFPSB, MLDSB, TBBGJ, TFGJQ, and TFBGQ in St. Paul, MN and Crookston, MN fields in 2012 and to Pt race BBBQJ in El Batan, Mexico field in 2013.
Curator Note (VCB, 04/2019). QTL names and markers associated with this QTL are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate this QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.
Environment
St. Paul, MN Field 2012
Crookston, MN Field 2012
El Batan, Mexico Field 2013
Reference
ReferenceAoun M et al. (2016) Genome-Wide Association Mapping of Leaf Rust Response in a Durum Wheat Worldwide Germplasm Collection The Plant Genome 9.