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GrainGenes QTL Report: QSpn.SpanishDurum-3A

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QTL
QSpn.SpanishDurum-3A
Trait Affected
Spikelets per spike
Synonym
QTL0125_SLNS-Giraldo_et_al__2016
QTL0129_SLNS-Giraldo_et_al__2016
Ontology
TO:0000456Planteomespikelet number
Trait Study
Agromorphology and grain quality, Spanish tetraploid landraces, Giraldo2016
Chromosome
3A
Positive Significant Marker
IWB36738
[ Show all 7 ]
LOD Peak Location
IWB10674
wPt-2202
wPt-6509
Species
Triticum turgidum ssp. durum
Triticum turgidum ssp. turgidum
Triticum turgidum ssp. dicoccon
Comment
type of mapping = GWAS-QTL
Curator Note (VCB, 04/2019). QTL names and markers associated with this QTL are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate this QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.
Reference
ReferenceGiraldo P et al. (2016) Genetic Diversity and Association Mapping for Agromorphological and Grain Quality Traits of a Structured Collection of Durum Wheat Landraces Including subsp. durum, turgidum and diccocon PLoS One 11:e016657.

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