GrainGenes QTL Report: QTL0029_LR-Aoun_et_al_

GrainGenes QTL Report: QTL0029_LR-Aoun_et_al__2016

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QTL

QTL0029_LR-Aoun_et_al__2016

Browser

https://wheat.pw.usda.gov/jb/?data=%2Fggds%2Fwhe-svevo2018&tracks=QTL&loc=QTL0029_LR-Aoun_et_al__2016

Trait Affected

Reaction to leaf rust

Synonym

QLr.locus-5A.2

QLr.WorldDurum-5A.2

Ontology

TO:0000439	Planteome	fungal disease resistance
TO:0020057	Planteome	wheat leaf rust disease resistance
TO:0020056	Planteome	barley leaf rust disease resistance
TO:0020057	Planteome	wheat leaf rust disease resistance

Species

Triticum turgidum ssp. durum

Comment

Curator Note (VCB, 04/2019). QTL names and markers associated with this QTL are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate this QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.

Reference

Maccaferri M et al. (2019) Durum wheat genome highlights past domestication signatures and future improvement targets Nature Genetics 51:885-895.

Aoun M et al. (2016) Genome-wide association mapping of leaf rust response in a durum wheat worldwide Germplasm collection. Plant Genome 9:3.


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