GrainGenes Sequence Report: K03075

Locus Comment: Original source text: Wheat (T.aestivum cv. Yamhill) DNA, library; of J.Slighton and M.Murray, clone pW8142 and cDNA to mRNA.; Sequence in computer-readable form provided by D.Soell,; 04-JUL-1985.; A TATA box is located at positions 817-824 and potential poly-A; signals at 1941-1946 and 1998-2003. Five P-boxes (containing many; proline codons) are found at 1078-1113, 1114-1149, 1150-1167,; 1168-1203 and 1204-1239. The P-box presumably arose in the; ancestral alpha/beta-gliadin gene and was multiplied prior to the; extensive multiplication of the whole gene. Every P-box is; slightly different from every other. Two polyglutamine stretches; reside at 1273-1335 and 1543-1626. In wheat DNA 'cg' and 'cng'; sequences are over 80% methylated to m5c.

EMBL Feature

mat_peptide	973	1860	Location: 973..1860
sig_peptide	922	972	alpha/beta-gliadin signal peptide	Location: 922..972

DNA

aatttgacatgcacagctcctgaccctgccaatattgttgcagctgcgct
cgcaagcctttgcgtagatgatcactttatatgatttgtgtaaaaccaaa
ataagatctacaaacgaatagaagctagagcgtaccttggcgtgcacaca
cattgcaagccatacctaaccttgataagtgttaatgacttgtacaacat
atacatcacttaagacaagtaaaagcgatttgatgagtcatggtctatca
aagcaagccacattactagtctaatccatcttaacaggtcacgcatgatt
acaatcttgtttgtgtgcaagtcaagcctatctagtttacacgtaacaac
ttgtaagaacattaccaaaagttgatgttgctaataagtgtagaacacct
acaacactgacatgtaaaagaatttgatgagtcatggcctactaaagcaa
gttacattactagtcttatgtatcttaacatgccacacaagattacaaac
taagttctgtggccagccatgcttatctagtttatgtgtaaaaatttgca
aacattacaaacttagtttcagaaaagtaggcaatctagattagtgtttg
agttgtaaagtgaacaagatgagtcatgcgtgttatcacacctttttggt
ggtggaatgatagtgcaacaacaacggaactttcaatgactagtccaaga
atacacttgtaagtagtgccaccaaacacaacataccaaattatgatttt
gggaagcatccaaacactttacacacaagcaaatgccaattgtgaaagag
atcatgccatgacagctataaataggcccgcatcgatgatgatcatcctt
cctcatccatcattctcataagtagagtgcatcattcaaggcaagcaagc
agtggtcaatacaaatccatcatgaagacctttctcatccttgccctcgt
ggcgaccaccgccacaactgcagttagagttccagtgccacaattgcagc
caaaaaatccatctcagcaacagccacaagagcaagttccattggtacaa
caacaacaatttccagggcagcaacaacaatttccaccacaacagccata
tccgcagccgcaaccatttccatcacaacaaccatatctgcagctgcaac
catttccgcagccgcaaccatttctgccacaactaccatatccgcagccg
caatcatttccaccacaacaaccatatccacaacagcgaccaaagtatct
acaaccacaacaaccaatttcgcagcaacaagcacaacaacaacaacaac
aacaacaacaacaacaacaacaacaacaacaacaaatccttcaacaaatt
ttgcaacaacaactgattccatgcagggatgttgtcttgcaacaacacaa
catagcgcatgcaagctcacaagttttgcaacaaagtacttaccagctat
tgcaacaattgtgttgtcaacaactgttgcagatccctgagcagtcgagg
tgccaagccatccataatgttgttcatgctattattatgcatcaacaaga
acaacaacaacagttgcaacaacaacaacaacagcaactgcaacaacaac
aacaacaacaacaacaacaacaacaaccgtcaagccaggtctccttccaa
cagcctcagcagcaatatccatcaagccagggctccttccagccatctca
gcaaaacccacaggcccagggctctgtccaacctcaacaactgccccagt
tcgcggaaataaggaacctagcgctacagacgctacctgcaatgtgcaat
gtctacatccctccacattgctcgaccaccattgcgccatttggcatctt
tggtaccaactgagaagagaagaactctagtgctagatatatgaaacacc
gttttcttagtccatgatttggtcgttgtagcagtgaaaaaataaagtga
catgcactatcatgtaagaacccgaactatactagttcaaacttgggaat
aaaagacaaacacatgtcttgtctacatatgattgtttgtttgagttcca
ttcatgtgccatcacaagttcacccctaattatatatattatgcattaag
tagatatttatgttgcattaatctaaagataaaaaaatgagtctgaaact
tgaattaaattgaagtattttctaggacttccaaatggagtattattaaa
gtagtaaggcaatccacatccttggcttgccctttatcaattatttccag
agaagcattcaattcatcaatcaattacatcgatttttgtggctggtact
tctcctcaacatgagtatattcattgcggctatccaacgcatgaatgagg
tactggctgaccactccttctcatgctctggagcagtgctagctgactgc
ttctcatgtgaagggacgcaggcacaggagaggtgttccgggtgggccag
gggagtaagaagtggccatggcagtggttcggacgcttgcaaagtcccgt
agtttgtatatggtttacgggaaaatgcacatttggaccggcctgcgggg
ccgatataggaccgtattggatggagaaacatgtcctcatgttgcgagcg
gtttgagggttaggtttggagatagcccttacttggcccctcgttgtaaa
acacgtttgacgatagttttgtctcggttcaaatatatgtcaagtttgac
aagttcataggaaattttttatcatatctacagtaccatacaaataccac
catagacaaaaaacatatttcacactgcaccatgaattggtcaggcctaa
aatgttgggtatggagactctattctcttttggcatgagttgcctcggtc
tcaaaagtttcatgaactgttctcttttgccactaagaaaaagctctctt
tgcctgattttattcatagtgaccatatggctctctatttcataggcata
tcaccgtcagctctgctcatcatgaactcatgactagttcatcaaaaaaa
ttcaataaagggaataaaataatatcacgaagataccaattacgaagccg
acgcctgcgtgtgctatcaacaagatatcgaaagcagtgcaatcaaggat
acgcacagggccagaaaaaatatagaagaaaaaagactgctccaaggtga
taaatcactagcatcagtagcactctaagcacaccgaagactaacgtcca
gattacaaaaaaaggtttcttccaaaagcaaccccccaagaaggaaacaa
tgcacaagcgttgtcattatccgattgggagatcgtgggttttcacctag
aaaattcgaa

BLAST

BLAST Search


GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.