Query (optional)   in Class  

GrainGenes Trait Study Report: Root system architecture, Colosseo x Lloyd, Maccaferri2016

[Submit comment/correction]

Trait Study
Root system architecture, Colosseo x Lloyd, Maccaferri2016
ReferenceMaccaferri M et al. (2016) Prioritizing quantitative trait loci for root system architecture in tetraploid wheat. Journal of Experimental Botany 67:1161-1178.
TO:0000227Planteomeroot length
[ Show all 6 ]
Parental Description
ColosseoAn Italian cultivar with high yield potential but poorly adaptated to Southern Mediterranean environments under high terminal drought and heat
LloydA US cultivar well adapted to the relatively low-input conditions typical of the USA Northern Plains
Population Size
Population Type
Recombinant Inbred Lines (RILs)
QTL Analysis Method
Single marker analysis and multiple interval mapping (MIM) in Windows QTL Cartographer v2.5
Markers Tested
QTLs Found
QTL names created by GrainGenes curators to align with common QTL nomenclature with synonyms to the QTL id codes in the Svevo genome assembly.
Curator Note (VCB, 04/2019). QTL names and markers associated with QTL in this traitstudy are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate these QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.
[ Show all 37 ]

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.