Query (optional)   in Class  

GrainGenes Trait Study Report: Semolina Yellow Traits, AABB Collection, Colasuonno2017

[Submit comment/correction]

Trait Study
Semolina Yellow Traits, AABB Collection, Colasuonno2017
Reference
ReferenceColasuonno P et al. (2017) The carotenoid biosynthetic and catabolic genes in wheat and their association with yellow pigments BMC Genomics 18:122.
Ontology
CO_321:0000674Planteomewheat semolina yellow pigment content trait
Population Size
233
Population Type
Tetraploid wheat collection
QTL Analysis Method
GWAS
Markers Tested
81587
QTLs Found
41
Comment
Curator Note (VCB, 04/2019) Previously curated in GrainGenes in a method where traitstudies are seperated by trait and evaluation year. This traitstudy record was made in April 2019 when synonyms were created among the original QTL set and the encoded QTL included with the Triticum turgidum ssp. durum cv. Svevo RefSeq v1.0 and is intended to combine all QTL from this paper.
See QTL linked from the paper to access the 9 QTL not included on the assembly.
Curator Note (VCB, 04/2019). QTL names and markers associated with QTL in this traitstudy are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate these QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.
QTL
QYI.Col-1B.1
[ Show all 32 ]

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.