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GrainGenes Trait Study Report: Spike compactness, Langdon x LDNIsA-2A, Faris2014c

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Trait Study
Spike compactness, Langdon x LDNIsA-2A, Faris2014c
Reference
ReferenceFaris JD et al. (2014) Molecular and comparative mapping of genes governing spike compactness from wild emmer wheat. Molecular Genetics and Genomics 289:641-651.
Ontology
CO_321:0000055Planteomewheat spike density trait
TO:0000456Planteomespikelet number
TO:0000431Planteomeear length
Parental Description
LANGDONtetraploid durum wheat variety
LDN(ISA-2A)single chromosome substitution line of chromosome 2A from wild emmer wheat line Isreal A
Population Size
107
QTLs Found
3
Comment
Curator Note (VCB, 04/2019). QTL names and markers associated with QTL in this traitstudy are from two sources, the primary reference and information embedded in the QTL track of the GrainGenes genome browser for the Triticum turgidum ssp. durum cv. Svevo (RefSeq 1.0) assembly. QTL were initially curated by members of the International Durum Genome Sequencing Consortium who assigned the encoded QTL name and information on the assembly including computationally-aligned significant markers (SNPs, DArTs, SSRs). To curate these QTL for GrainGenes, the primary reference was reviewed, the original QTL name was synonymized, and original markers were added to the significant marker list shown on the QTL report page. GrainGenes users are advised to review the qtl track in the Svevo assembly for additional position information and confidence intervals, as well as the primary reference for additional statistics.
QTL
QCmp.fcu-2A
QEl.fcu-2A
QSpn.fcu-2A

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