*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat D-1DS, Ae. tauschii
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 1DS, Ae. tauschii
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat D - 1DS, Ae. tauschii [ View Map Set Info ]
Map Name: 1DS, Ae. tauschii
Map Start: 0
Map Stop: 45.5
Features by Type:
24 locus
24 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 24 of 24.
Wheat D - 1DS, Ae. tauschii - 1DS, Ae. tauschii
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xmwg938-1D locus 17.3 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-1D Xmwg938-1D locus -32.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xmwg938-1D locus 12.5 () Automated name-based View Maps
Wheat D - 1DS, A.tauschii, AUS x CPI - 1DS-A.tauschii-AUSxCPI Xmwg938-1D locus 5.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-1D Xmwg938-1D locus 7.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-1D Xmwg938-1D locus 14.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xmwg938-1D locus 17.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xmwg938-1D locus 22.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xmwg938-1D locus 6.6 () Automated name-based View Maps
Xbcd1434-1D locus 6.9 Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-1D Xbcd1434-1D locus 3.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-1D Xbcd1434-1D locus 2 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D bcd1434 locus 0.9 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-1H BCD1434 locus 22.2 () Automated name-based View Maps
Wheat ABD - Wheat sprouting markers - Ta-Anderson-1A BCD1434 locus 0 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-1H BCD1434 locus 0 () Automated name-based View Maps
Wheat D - T.tauschii - Tt-Gill-1D BCD1434 locus 25.9 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-1H BCD1434 locus 1.09 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H BCD1434 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat.Rye recombinant - 1D.1R recombinants BCD1434 locus 89.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xbcd1434-1D locus 8.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xbcd1434-1D locus 13.4 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H BCD1434 locus 6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xbcd1434-1D locus 17.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-1D Xbcd1434-1D locus 9.7 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H BCD1434 locus 0 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H BCD1434 locus 0 () Automated name-based View Maps
Xabc156-1D locus 38.3 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D abc156 locus 15.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR-D - Ta-Synthetic/Opata-SSR_D-1D Xabc156-1D locus 22.6 () Automated name-based View Maps
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-1H ABC156 locus 27.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xabc156-1D locus 32.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-1D Xabc156-1D locus 29.4 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-7H ABC156 locus -13.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-1D Xabc156-1D locus 42.1 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A abc156 locus 22.7 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-2H ABC156 locus 17.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B abc156 locus 14 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xabc156-1D locus 26.5 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-6H ABC156 locus 80.49 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xabc156-1D locus 36.7 () Automated name-based View Maps
Xmwg60-1D locus 24.9 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-1D Xmwg60-1D locus 21.8 () Automated name-based View Maps
Barley - Barley, VxHs - Hordeum-Graner1-1H MWG60 locus 28 () Automated name-based View Maps
Gli-D1 locus 9.2 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-1D Gli-D1 locus 4.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-1D Gli-D1 locus 0 () Automated name-based View Maps
Wheat D - T.tauschii - Tt-Gill-1D Gli-D1 locus 18.3 () Automated name-based View Maps
Xwhs179-1D.1 locus 12.8 Wheat D - 1DS, A.tauschii, AUS x CPI - 1DS-A.tauschii-AUSxCPI Xwhs179-1D.1 locus 5.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xwhs179-1D.1 locus 12.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xwhs179-1D.1 locus 9.2 () Automated name-based View Maps
Xwhs179-1D.2 locus 18.8 Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Xwhs179-1D.2 locus 22.5 () Automated name-based View Maps
Wheat D - 1DS, A.tauschii, AUS x CPI - 1DS-A.tauschii-AUSxCPI Xwhs179-1D.2 locus 8.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-1D Xwhs179-1D.2 locus 15.1 () Automated name-based View Maps
Xiag95-1D locus 21.8 Wheat D - 1DS, A.tauschii, AUS x CPI - 1DS-A.tauschii-AUSxCPI Xiag95-1D locus 13.8 () Automated name-based View Maps
XrgaYr10-1D.2 locus 0 No other positions
Xdms33-1D locus 0.6 No other positions
Xrga5.2c-1D locus 1.8 No other positions
XrgaYr10-1D.1 locus 6.4 No other positions
Xrga5.2a-1D locus 6.4 No other positions
pic18-1D locus 12.8 No other positions
Xutv1518-1D locus 17.3 No other positions
LrK10-1D locus 21.8 No other positions
Ttrga1-1D locus 21.8 No other positions
Xmwg2021-1D locus 21.8 No other positions
b6-1D locus 21.8 No other positions
Xmwg2083-1D locus 32.9 Barley - Barley genes - Hordeum-Genes-1H MWG2083 locus 58.7 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H MWG2083 locus 16 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-1H MWG2083 locus 7.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H MWG2083 locus 25 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H MWG2083 locus 19.77 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-1H MWG2083 locus 32.1 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-1H MWG2083 locus -27 () Automated name-based View Maps
Xcdo388-1D locus 33 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2B cdo388 locus 52.2 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B cdo388 locus 8.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 6A cdo388 locus 44.9 () Automated name-based View Maps
Rice - Rice, BxOl - Rice-CU-9 CDO388 locus 23.7 () Automated name-based View Maps
XksuG9-1D locus 45.5 No other positions
Lr21 locus 0 Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Lr21 locus 0 () Automated name-based View Maps
Wheat ABD - Wheat genes - Triticum-Genes-1D Lr21 locus -40 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Lr21 locus 0 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-1 Lr21 locus 0 () Automated name-based View Maps
Sr33 locus 30.7 Wheat ABD - Wheat genes - Triticum-Genes-1D Sr33 locus -27 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-1D Sr33 locus 15.5 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-1D Sr33 locus 25 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-1 Sr33 locus 5.5 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.