*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-2DL, Augusta x Geneva
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Ta-Augusta/Geneva-2D
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - 2DL, Augusta x Geneva [ View Map Set Info ]
Map Name: Ta-Augusta/Geneva-2D
Map Start: 0
Map Stop: 85.5
Features by Type:
4 locus
1 qtl
5 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 5 of 5.
Wheat ABD - 2DL, Augusta x Geneva - Ta-Augusta/Geneva-2D
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xcdo373-2D locus 27.9 Barley - Barley, BinMap 2005 - Hordeum-Bins-2H CDO373 locus 140.1 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg20 CDO373 locus 14.7 () Automated name-based View Maps
Oat - Oat-2003-OglexMAM17-5 - Oat-2003-OglexMAM17-5_12 cdo373 locus 50 (cM) Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-2H CDO373 locus 124.5 () Automated name-based, Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-2H CDO373 locus 210.39 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H CDO373 locus 124.06 () Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-5H CDO373 locus 121.33 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H CDO373 locus 118.53 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-24_26_34 CDO373 locus 122 () Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-2H CDO373 locus 121.33 (cM) Automated name-based View Maps
Oat - Oat-2004-KxO-RGA - Oat-2004-KxO-RGA_KO24_26_34 cdo373 locus 26.12 (cM) Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_24_26_34 CDO373 locus 74 (cM) Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H CDO373 locus 126.6 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H CDO373 locus 118.53 () Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-2H CDO373 locus 121.33 (cM) Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H CDO373 locus 124.06 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-2H CDO373 locus 175.19 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-2H CDO373 locus 48.6 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_24-26-34 CDO373 locus 0 (cM) Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-2H CDO373 locus 121.33 (cM) Automated name-based View Maps
Oat - Oat-2013-KxO-RGA - RGA-2013_KO24_26_34 cdo373 locus 122 (cM) Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-20 CDO373 locus 14.7 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-2H CDO373 locus 124.05 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H CDO373 locus 121.3 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 CDO373 locus 124.06 () Automated name-based View Maps
Xbcd1095-2D locus 40.3 Oat - Oat-1997-KxO-QTL - Oat-1997-KxO-QTL_2 bcd1095 locus 6.1 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2B bcd1095 locus 73.2 () Automated name-based View Maps
Xbcd135-2D locus 0 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H BCD135 locus 124.19 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 BCD135 locus 124.19 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-7H BCD135 locus 28.91 () Automated name-based View Maps
Barley - Barley, CxS - Hordeum-CxS-7H BCD135 locus 8.33 () Automated name-based View Maps
Rice - Rice, BxOl - Rice-CU-4 BCD135 locus 20.7 () Automated name-based View Maps
Barley - Barley, Consensus 2023, FHB - Barley-ConsensusFHB-7H BCD135 locus 21.94 (cM) Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-1H BCD135 locus 6.07 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-2H BCD135 locus 140.1 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-7H BCD135 locus 22.2 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-2H BCD135 locus 123.71 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H BCD135 locus 124.19 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 2B bcd135 locus 74.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-7H BCD135 locus 20.9 () Automated name-based View Maps
Xbcd292-2D locus 85.5 Barley - Barley, CxS - Hordeum-CxS-2H BCD292 locus 198 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-2H BCD292 locus 68.6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H BCD292 locus 151.2 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H BCD292 locus 148.6 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-2H BCD292 locus 252.61 () Automated name-based View Maps
QWss.cnl-2D qtl 25 - 43 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.