*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-3B Physical
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Physical-3B
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
baccontig
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - 3B Physical [ View Map Set Info ]
Map Name: Physical-3B
Map Start: -46.8
Map Stop: 203.8
Features by Type:
214 baccontig
635 locus
849 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 849.       Previous | of 34 | Next
Wheat ABD - 3B Physical - Physical-3B
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
darts32 locus 3.92 No other positions
gwm4181 locus 4 No other positions
darts387 locus 4 No other positions
barc12 locus 4.46 Wheat A - T. boeoticum x monococcum - T.b.xT.m.-3A Xbarc12-3A locus 33.6 () Automated name-based View Maps
Wheat AB - Wheat AB, Carotenoid QTL, 2017 - Wheat_AB_2017_Carotenoid_QTL-3A barc12 locus 9.6 () Automated name-based View Maps
Wheat ABD - Wheat_Yr76_2016 - Wheat_Yr76_2016-3A barc12 locus 26 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A barc12 locus 9.1 () Automated name-based View Maps
cfb3530 locus 4.9 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xcfb3530-3B locus -0.94 () Automated name-based View Maps
cfb3296 locus 4.9 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xcfb3296-3B locus -0.82 () Automated name-based View Maps
nw1600 locus 5.5 No other positions
barc75 locus 5.5 Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-3B Xbarc75-3B locus 10.6 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B barc75 locus 1.8 () Automated name-based View Maps
cfb3417 locus 5.5 Wheat ABD - Wheat, Physical, SSR - Chinese_Spring_Deletion_SSR_3B Xcfb3417-3B locus -0.82 () Automated name-based View Maps
wmm756 locus 5.5 No other positions
gwm1034 locus 5.54 Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3B gwm1034 locus 8.17 (cM) Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B gwm1034 locus 3.8 () Automated name-based View Maps
wPt-7984 locus 5.55 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-7984 locus 5.9 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3B wPt-7984 locus 12.65 (cM) Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3B wPt-7984-3B locus 22.6 () Automated name-based View Maps
wPt-7341 locus 5.55 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wPt-7341 locus 9.9 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-7341 locus 31.92 () Automated name-based View Maps
Wheat ABD - Wheat, Yr Update, 2021 - Wheat_Yr_2021-3A wPt-7341 locus 21.32 (cM) Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-7341 locus 31.92 () Automated name-based View Maps
wPt-8855 locus 5.55 Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 wPt-8855 locus 31.92 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A wPt-8855 locus 9.1 () Automated name-based View Maps
Wheat ABD - Wheat-2014-Consensus-Ug99-Update - Wheat-2014-Consensus-Ug99-Update wPt-8855 locus 31.92 () Automated name-based View Maps
Wheat ABD - Wheat, P91193D1 x P92201D5 - P91193D1/P92201D5-3B wPt-8855-3B locus 25.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wPt-8855 locus 23.3 () Automated name-based View Maps
nw1821 locus 5.56 No other positions
gwm533 locus 5.57 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B gwm533 locus 5.3 () Automated name-based View Maps
gwm4017d locus 5.58 No other positions
gwm4017f locus 5.58 No other positions
gpw7080 locus 5.59 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-3A Xgpw7080-3A locus -1.3 () Automated name-based View Maps
Wheat ABD - Wheat_Consensus_2014_Ug99_Rust - Wheat_Consensus_2014_Ug99_Rust_3 gpw7080 locus 4.09 () Automated name-based View Maps
gwm4017a locus 5.59 No other positions
swm13 locus 5.6 No other positions
cfb5038 locus 5.65 No other positions
fba190 locus 5.83 Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B fba190 locus 6.2 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 5A fba190 locus 57.3 () Automated name-based View Maps
Wheat ABD - Wheat, Composite, 2004 - Wheat-Composite2004-3B Xfba190.2 locus 14 () Automated name-based View Maps
nw1644 locus 5.88 No other positions
wmc674 locus 6 Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-3B Xwmc674-3B locus 4.4 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B wmc674 locus 4.4 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.