*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Wheat ABD-5BL, CS, 0.75-0.79 interval
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 5BL, CS, 0.75-0.79 interval
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
breakpoint
breakpointinterval
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Wheat ABD - 5BL, CS, 0.75-0.79 interval [ View Map Set Info ]
Map Name: 5BL, CS, 0.75-0.79 interval
Map Start: 0
Map Stop: 49.5
Features by Type:
3 breakpoint
2 breakpointinterval
42 locus
47 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 47.       of 2 | Next
Wheat ABD - 5BL, CS, 0.75-0.79 interval - 5BL, CS, 0.75-0.79 interval
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Xgwm408-5B locus 14.4 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xgwm408-5B locus 95.2 () Automated name-based View Maps
Wheat AB - Durum wheat, Kofa x UC1113 - Kofa/UC1113-5B Xgwm408-5B locus 100.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xgwm408-5B locus 89.2 () Automated name-based View Maps
Wheat ABD - Wheat, Consensus SSR, 2004 - Ta-SSR-2004-5B Xgwm408-5B locus 117.2 () Automated name-based View Maps
Wheat ABD - Wheat, Chinese Spring x SQ1 - CS/SQ1-5B Xgwm408-5B locus 133.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B Xgwm408-5B locus 87.5 () Automated name-based View Maps
Wheat ABD - Wheat, USG3209 x Jaypee - USG3209/Jaypee-5B Xgwm408-5B locus 0 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xgwm408-5B locus 111 () Automated name-based View Maps
Xmwg914-5B locus 1.4 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5B Xmwg914-5B locus 32.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xmwg914-5B locus 79.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xmwg914-5B locus 59.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xmwg914-5B locus 67.3 () Automated name-based View Maps
Xbcd307-5B locus 0.5 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xbcd307-5B locus 84 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5B Xbcd307-5B locus 63.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xbcd307-5B locus 62.2 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xbcd307-5B locus 36.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xbcd307-5B locus 65.7 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-5B Xbcd307-5B locus 105.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5B Xbcd307-5B locus 75.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xbcd307-5B locus 72.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5B Xbcd307-5B locus 37.6 () Automated name-based View Maps
Xbcd1030-5B locus 10 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5B Xbcd1030-5B locus 59.2 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5B Xbcd1030-5B locus 96.3 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5B Xbcd1030-5B locus 82.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xbcd1030-5B locus 84.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xbcd1030-5B locus 79.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xbcd1030-5B locus 93.8 () Automated name-based View Maps
Xksu919(Lpx)-5B locus 11.4 Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5B Xksu919(Lpx)-5B locus 62.5 () Automated name-based View Maps
Xbcd450-5B locus 14 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xbcd450-5B locus 63 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5B Xbcd450-5B locus 65.9 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-5B Xbcd450-5B locus 165.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xbcd450-5B locus 89.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xbcd450-5B locus 99.7 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xbcd450-5B locus 84.7 () Automated name-based View Maps
Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B Xbcd450-5B locus 0.69 () Automated name-based View Maps
Xcdo584-5B locus 23.8 Wheat ABD - Wheat, Synthetic x Opata, SSR - Ta-Synthetic/Opata-SSR-5B Xcdo584-5B locus 123.9 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, SSR 2 - Ta-Synthetic/Opata-SSR2-5B Xcdo584-5B locus 104 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xcdo584-5B locus 118.4 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xcdo584-5B locus 106 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, DR Genes - Ta-Synthetic/Opata-DR-5B Xcdo584-5B locus 84.6 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, gbx RFLP - Ta-Synthetic/Opata-gbx-5B Xcdo584-5B locus 116.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xcdo584-5B locus 101.8 () Automated name-based View Maps
Xpsr145-5B locus 23.4 Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B Xpsr145-5B locus 0.81 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xpsr145-5B locus 98.1 () Automated name-based View Maps
Wheat ABD - Wheat, Gale - Ta-Gale-5B Xpsr145-5B locus 78.9 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B Xpsr145-5B locus 99.7 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xpsr145-5B locus 98.5 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xpsr145-5B locus 120.2 () Automated name-based View Maps
Xwg908-5B locus 20.4 Wheat ABD - Wheat, Courtot x Chinese Spring, GPW - Ta-Courtot/CS-GPW-5B Xwg908-5B locus 112.9 () Automated name-based View Maps
Xfba348-5B locus 0.5 Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xfba348-5B locus 69.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xfba348-5B locus 78.5 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xfba348-5B locus 66.1 () Automated name-based View Maps
Xfba351-5B locus 23 Wheat ABD - Wheat, Synthetic x Opata, BARC - Ta-Synthetic/Opata-BARC-5B Xfba351-5B locus 102.8 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata, GPW - Ta-Synthetic/Opata-GPW-5B Xfba351-5B locus 108.1 () Automated name-based View Maps
Wheat ABD - Wheat, Synthetic x Opata - Ta-Synthetic/Opata-5B Xfba351-5B locus 125.1 () Automated name-based View Maps
Xpsr79-5B locus 22.6 Wheat ABD - Wheat, Gale - Ta-Gale-5B Xpsr79-5B locus 77.9 () Automated name-based View Maps
Xpsr120-5B locus 0.5 Wheat AB - T. turgidum, Messapia x dicoccoides - Tturgidum-MxM-5B Xpsr120-5B locus 48.1 () Automated name-based View Maps
Wheat ABD - Wheat, Arina x Forno - Triticum-AxF-5B Xpsr120-5B locus 64.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, AFLP - Tturgidum-MxM-AFLP-5B Xpsr120-5B locus 53.1 () Automated name-based View Maps
Wheat AB - T. turgidum, Messapia x dicoccoides, SSR - Tturgidum-SSR-5B Xpsr120-5B locus 56.7 () Automated name-based View Maps
Xbcd1235-5B locus 40 Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xbcd1235-5B locus 151.8 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-5B Xbcd1235-5B locus 238.9 () Automated name-based View Maps
Xcdo457-5B locus 38 Wheat AB - T. turgidum, JK x Cham1, 2 - Tturgidum-JKxC2-5B Xcdo457-5B locus 247.6 () Automated name-based View Maps
Wheat AB - T. turgidum, JK x Cham1 - Tturgidum-JKxC-5B Xcdo457-5B locus 155.9 () Automated name-based View Maps
Xmwg72-5B locus 0.01 Barley - Barley, VxHs - Hordeum-Graner1-5H MWG72 locus 213.5 () Automated name-based View Maps
XksuQ63-5B locus 0.5 No other positions
Xwg1026-5B locus 0.5 No other positions
Xtag251-5B locus 1.4 No other positions
XksuQ11-5B locus 1.4 No other positions
Xcdo400-5B locus 5.1 Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B Xcdo400-5B locus 0.69 () Automated name-based View Maps
Xbcd183-5B locus 5.99 No other positions
Xrz575-5B locus 11.8 Rice - Rice, BxOl - Rice-CU-3 RZ575 locus 112 () Automated name-based View Maps
Xcdo465-5B locus 13.1 No other positions
Xwg644-5B locus 14 Wheat ABD - Wheat, Physical, Group 5 - Ta-Physical-Sarma-5B Xwg644-5B locus 0.69 () Automated name-based View Maps
Wheat ABD - Wheat, Cadmium 5B, 2010 - Wheat_W9262-260D3/Kofa-5B Xwg644-5B locus 7.5 (cM) Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.