*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, AxHs/QTL
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-Pillen-1H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, AxHs/QTL [ View Map Set Info ]
Map Name: Hordeum-Pillen-1H
Map Start: 17
Map Stop: 100
Features by Type:
8 locus
10 qtl
18 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 18 of 18.
Barley - Barley, AxHs/QTL - Hordeum-Pillen-1H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Bmac0213 locus 28 Barley - Barley, LxHs - Hordeum-LxHs-1H Bmac0213 locus 28 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 Bmac0213 locus 38.08 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H Bmac0213 locus 30.81 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-1H Bmac0213 locus 29.63 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-1H Bmac0213 locus 22.6 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-1H Bmac0213 locus 21.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H Bmac0213 locus 32.8 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-1H Bmac0213 locus 8.9 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H Bmac0213 locus 38.08 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H Bmac0213 locus 30.81 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H Bmac0213 locus 38.08 () Automated name-based View Maps
Bmag0211 locus 62 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H Bmag0211 locus 70.56 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H Bmag0211 locus 60.42 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-1H Bmag0211 locus 56.66 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H Bmag0211 locus 58.2 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H Bmag0211 locus 61.2 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-1H Bmag0211 locus 62 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H Bmag0211 locus 70.56 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-1H Bmag0211 locus 45.1 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-1H Bmag0211 locus 58.3 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H Bmag0211 locus 57.6 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-1H Bmag0211 locus 65 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 Bmag0211 locus 70.56 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-1H Bmag0211 locus 58.79 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-1H Bmag0211 locus 57.71 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-1H Bmag0211 locus 50.9 () Automated name-based View Maps
HVALAAT locus 57 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 HVALAAT locus 67.34 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H HVALAAT locus 64.84 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-1H HVALAAT locus 57 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H HVALAAT locus 59.4 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-1H HVALAAT locus 32 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H HVALAAT locus 67.34 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-1H HVALAAT locus 50.9 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H HVALAAT locus 67.34 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-1H HVALAAT locus 36 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-1H HVALAAT locus 47.4 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-1H HVALAAT locus 61.19 () Automated name-based View Maps
HV02287 locus 100 Barley - Barley, B73xCPI - Barley, B73xCPI-7H HV02287 locus 185.2 () Automated name-based View Maps
Centromere-1H locus 60 Barley - Barley, HxM/QTL - Hordeum-HxM-base-1H Centromere-1H locus 54 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-1H Centromere-1H locus 48.8 - 55.7 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-1H Centromere-1H locus 102.8 - 105.8 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-1H Centromere-1H locus 57 () Automated name-based View Maps
Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-1 Centromere-1H locus 38.5 () Automated name-based View Maps
HVM20 locus 59 Barley - Barley, Lx41 - Hordeum-Lx41-1H HVM20 locus 29.1 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H HVM20 locus 66.25 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-1H HVM20 locus 35.8 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H HVM20 locus 59.4 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-1H HVM20 locus 59.2 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-1H HVM20 locus 58 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-1H HVM20 locus 49.3 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-1H HVM20 locus 137.2 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-1H HVM0020 locus 50.9 () Automated name-based View Maps
Oat - Oat, AxM Doubled Haploid, 2008 - Oat-AxM-DH2008-28 HVM20 locus 12 () Automated name-based View Maps
HVM64 locus 59 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 HVM64 locus 67.86 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H HVM64 locus 67.86 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-1H HVM64 locus 60.46 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H HVM64 locus 67.86 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H HVM64 locus 65.55 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-1H HVM64 locus 58 () Automated name-based View Maps
GMS21 locus 17 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H GMS21 locus 21.1 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H GMS021 locus 26.44 () Automated name-based View Maps
QHea.pil-1H.1 qtl 17 No other positions
QHea.pil-1H.2 qtl 28 No other positions
QHea.pil-1H.3 qtl 57 No other positions
QHea.pil-1H.4 qtl 62 No other positions
QHei.pil-1H.1 qtl 57 No other positions
QHei.pil-1H.2 qtl 62 No other positions
QKer.pil-1H qtl 17 No other positions
QLoh.pil-1H.1 qtl 57 No other positions
QLoh.pil-1H.2 qtl 62 No other positions
QYld.pil-1H qtl 17 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.