*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, AxK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-AxK-1H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, AxK [ View Map Set Info ]
Map Name: Hordeum-AxK-1H
Map Start: 0.00
Map Stop: 145.90
Features by Type:
38 locus
38 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 38.       of 2 | Next
Barley - Barley, AxK - Hordeum-AxK-1H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
MWG2077 locus 86.00 Barley - Barley consensus - Barley-Consensus-1H MWG2077 locus 23.40 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-1H MWG2077 locus 83.50 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-1H MWG2077 locus 89.00 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-1H MWG2077 locus 63.90 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-5H MWG2077 locus 217.70 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H MWG2077 locus 85.00 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H MWG2077 locus 85.70 () Automated name-based View Maps
Rye - Rye, P87 x P105, 2004 - Secale-PxP-2004-1R Xmwg2077-1R locus 63.30 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H MWG2077 locus 83.16 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-1H MWG2077 locus 88.30 () Automated name-based View Maps
Barley - Barley genes - Hordeum-Genes-1H MWG2077 locus 7.60 () Automated name-based View Maps
ABC160 locus 71.80 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H ABC160 locus 77.60 () Automated name-based View Maps
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-1H ABC160-1H locus 75.77 () Automated name-based View Maps
Barley - Barley genes - Hordeum-Genes-1H ABC160 locus 0.40 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H ABC160 locus 76.20 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-1H ABC160 locus 74.89 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-1H ABC160 locus 39.20 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H ABC160 locus 76.62 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-1H ABC160 locus 84.60 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 ABC160 locus 84.31 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-1H ABC160 locus 91.05 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-1H ABC160 locus 80.70 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H ABC160 locus 73.30 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-1H ABC160 locus 75.60 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-1H ABC160 locus 80.70 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-1H ABC160 locus 77.50 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H ABC160 locus 72.80 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-1H ABC160 locus 80.40 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-1H ABC160 locus 75.40 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H ABC160 locus 84.31 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H ABC160 locus 84.31 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H ABC160 locus 88.40 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-1H ABC160 locus 88.40 () Automated name-based View Maps
ABC261 locus 133.80 Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-1H ABC261 locus 132.60 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-1H ABC261 locus 145.50 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H ABC261 locus 125.88 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-1H ABC261 locus 137.90 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H ABC261 locus 134.00 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-1H ABC261 locus 118.82 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-1H ABC261 locus 137.90 () Automated name-based View Maps
Barley - Barley genes - Hordeum-Genes-1H ABC261 locus -50.10 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-1H ABC261 locus 138.60 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-1H ABC261-1H locus 113.10 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-1H ABC261 locus 139.10 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-1H ABC261 locus 142.05 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-1H ABC261 locus 100.50 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H ABC261 locus 127.80 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H ABC261 locus 136.85 () Automated name-based View Maps
Barley - Barley, HxT basemap - Hordeum-HxT-base-1H ABC261 locus 143.70 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-1H ABC261 locus 120.80 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H ABC261 locus 145.00 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-1H ABC261 locus 186.13 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 ABC261 locus 136.85 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H ABC261 locus 119.20 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H ABC261 locus 125.88 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-1H ABC261 locus 138.50 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H ABC261 locus 136.85 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-1H ABC261 locus 129.04 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H ABC261 locus 122.20 () Automated name-based View Maps
ABG055 locus 145.90 Barley - Barley genes - Hordeum-Genes-1H ABG055 locus -58.70 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-1H ABG055 locus 147.90 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H ABG055 locus 156.00 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H ABG055 locus 147.46 () Automated name-based View Maps
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-1H ABG055 locus 166.50 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-1H ABG055 locus 147.90 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H ABG055 locus 138.30 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H ABG055 locus 147.46 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 ABG055 locus 147.46 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-1H ABG055 locus 158.00 () Automated name-based View Maps
MWG938 locus 5.70 Barley - Barley, HxM/QTL - Hordeum-HxM-base-1H MWG938 locus 0.00 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-1H MWG938 locus 20.41 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-1H MWG938 locus 3.40 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-1H MWG938 locus 1.50 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-1H MWG938 locus 2.30 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H MWG938 locus 9.80 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H MWG938 locus 11.63 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-1H MWG938 locus 9.26 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-1H MWG938 locus -34.70 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1D mwg938 locus 4.10 () Automated name-based View Maps
Wheat D - 1DS, A.tauschii, AUS x CPI - 1DS-A.tauschii-AUSxCPI Xmwg938-1D locus 5.20 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-1H MWG938 locus 14.58 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-1H MWG938 locus 24.40 () Automated name-based View Maps
Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-1H MWG938 locus 4.60 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H MWG938 locus 13.80 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-1H MWG938 locus 0.00 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H MWG938 locus 7.20 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1B mwg938 locus 9.80 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H MWG938 locus 11.63 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-1H MWG938 locus 14.58 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-1H MWG938 locus 6.37 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-1 MWG938 locus 14.58 () Automated name-based View Maps
e15m27-8 locus 0.00 No other positions
e02m18-9-1 locus 16.40 No other positions
MWG2261 locus 16.40 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H MWG2261 locus 22.41 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H MWG2261 locus 24.10 () Automated name-based View Maps
e06m30-8-2 locus 21.50 No other positions
e12m22-8 locus 32.10 No other positions
e09m27-9-2 locus 36.90 No other positions
e12m19-4-1 locus 41.00 No other positions
e13m25-6 locus 41.50 No other positions
e09m30-9-1 locus 50.10 No other positions
e13m31-8 locus 50.10 No other positions
e09m23-7-2 locus 50.10 No other positions
e12m26-4-1 locus 50.10 No other positions
e05m19-9-2 locus 50.90 No other positions
e03m31-9-1 locus 50.90 No other positions
e11m17-8-2 locus 50.90 No other positions
e12m22-10-4 locus 50.90 No other positions
e12m22-10-3 locus 50.90 No other positions
e11m17-8-1 locus 51.70 No other positions
e12m19-4-2 locus 53.40 No other positions
e14m26-7-1 locus 54.40 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.