*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, AxK
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-AxK-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, AxK [ View Map Set Info ]
Map Name: Hordeum-AxK-3H
Map Start: 0
Map Stop: 155
Features by Type:
59 locus
59 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 59.       of 3 | Next
Barley - Barley, AxK - Hordeum-AxK-3H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
abg471 locus 35.3 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H abg471 locus 30.31 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H abg471 locus 44.1 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H abg471 locus -19 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H abg471 locus 33.14 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H abg471 locus 32.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A abg471 locus 21.2 () Automated name-based View Maps
Barley - Barley, HxT basemap - Hordeum-HxT-base-3H abg471 locus 17.2 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 abg471 locus 30.31 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B abg471 locus 46.09 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-3H abg471 locus 30.5 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H abg471 locus 32.7 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H abg471 locus 30.31 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H abg471 locus 23.7 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H abg471 locus 30.96 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-3H abg471 locus 35.4 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-3H abg471 locus 71.22 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-3H abg471 locus 32.6 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H abg471 locus 17.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H abg471 locus 44.3 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H abg471 locus 38 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-3H abg471 locus 33.3 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B abg471 locus 30.7 () Automated name-based View Maps
uzu locus 66 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H uzu locus 76.9 () Automated name-based View Maps
Barley - Barley genes 2 - Hordeum-Genes2-3H uzu locus 0 () Automated name-based View Maps
MWG973 locus 108.5 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG973 locus 124 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG973 locus 99.91 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-3H MWG973 locus 128.7 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG973 locus 77.1 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H MWG973 locus 41.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG973 locus 111.4 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG973 locus 93.8 () Automated name-based View Maps
MWG848 locus 3 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG848 locus 38 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-3H MWG848 locus 13.1 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG848 locus 17.1 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG848 locus 13.92 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG848 locus 1.5 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-3H MWG848 locus 9.6 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H MWG848 locus 47.6 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG848 locus 23.7 () Automated name-based View Maps
ABG070 locus 0 Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-3H ABG070 locus 0 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H ABG070 locus 0.8 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H ABG070 locus 0 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H ABG070 locus 0 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H ABG070 locus 0 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 ABG070 locus 0 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H ABG070 locus 12.7 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H ABG070 locus 0 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H ABG070 locus 4.66 () Automated name-based View Maps
e09m27-10 locus 0 No other positions
e07m25-7-1 locus 8.4 No other positions
e05m18-7 locus 21.4 No other positions
e12m22-10-1 locus 34.5 No other positions
e05m19-4 locus 37.5 No other positions
e02m18-10 locus 38 No other positions
e14m27-4-1 locus 41.3 No other positions
e14m27-4-2 locus 42.3 No other positions
e06m23-7-2 locus 49.2 No other positions
e15m19-7 locus 49.2 No other positions
e05m19-6-1 locus 53.7 No other positions
e06m18-6 locus 53.7 No other positions
e15m19-10-2 locus 54.8 No other positions
e15m19-10-3 locus 54.8 No other positions
e15m28-9-2 locus 54.8 No other positions
e08m18-8 locus 56.9 No other positions
e02m18-9-2 locus 56.9 No other positions
e06m30-3-2 locus 56.9 No other positions
e05m19-6-2 locus 56.9 No other positions
e03m31-7-1 locus 56.9 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.