*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, B73xCPI
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Barley, B73xCPI-1H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, B73xCPI [ View Map Set Info ]
Map Name: Barley, B73xCPI-1H
Map Start: 0
Map Stop: 142.6
Features by Type:
134 locus
134 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 134.       Previous | of 6 | Next
Barley - Barley, B73xCPI - Barley, B73xCPI-1H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Bmag0012 locus 50.9 No other positions
Bmag0535 locus 50.9 No other positions
Bmag0644 locus 52.3 No other positions
Bmag0682 locus 52.3 No other positions
Bmag0725 locus 59.1 No other positions
Bmag0747.1H locus 50.9 No other positions
Bmag0873 locus 50.9 No other positions
Bmag0876 locus 42.7 No other positions
EBmac0542 locus 129.7 No other positions
EBmac0796 locus 124.3 No other positions
EBmacc0027 locus 52.3 No other positions
EBmag0817 locus 52.3 No other positions
GBM1002 locus 90.5 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1002-1H locus 97.7 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1002 locus 101.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1002 locus 103.2 () Automated name-based View Maps
GBM1004 locus 52.3 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1004-1H locus 59.4 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1004 locus 61.2 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1004 locus 60.42 () Automated name-based View Maps
GBM1007 locus 20.6 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1007-1H locus 30 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1007 locus 28.3 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H GBM1007 locus 31.1 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H GBM1007 locus 30.1 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1007 locus 26.45 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-1H GBM1007 locus 29.89 () Automated name-based View Maps
GBM1013 locus 59.1 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1013 locus 66.7 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1013 locus 67.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1013-1H locus 64.3 () Automated name-based View Maps
GBM1025 locus 52.3 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1025 locus 60.42 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1025 locus 61.2 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1025-1H locus 59.4 () Automated name-based View Maps
GBM1029 locus 50.9 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1029 locus 60.42 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1029-1H locus 59.4 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1029 locus 61.2 () Automated name-based View Maps
GBM1032 locus 50.9 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1032-1H locus 58.1 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1032 locus 59.19 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1032 locus 59.6 () Automated name-based View Maps
GBM1051 locus 57.8 Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-1H GBM1051 locus 67.8 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1051-1H locus 69.1 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1051 locus 69.17 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1051 locus 70.7 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-1H GBM1051 locus 68.4 () Automated name-based View Maps
GBM1053 locus 60.5 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-6H GBM1053 locus 49.11 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H GBM1053 locus 51.6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-6H GBM1053-6H locus 54.1 () Automated name-based View Maps
GBM1061 locus 124.3 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1061 locus 130.75 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1061 locus 130.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1061-1H locus 127.9 () Automated name-based View Maps
GBM1092 locus 74.4 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1092 locus 93.4 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1092 locus 91.79 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1092-1H locus 91.8 () Automated name-based View Maps
GBM1204 locus 135.2 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H GBM1204 locus 151.9 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1204 locus 141.7 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1204 locus 139.81 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1204-1H locus 131.7 () Automated name-based View Maps
GBM1234 locus 52.3 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H GBM1234 locus 62.4 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H GBM1234 locus 61.06 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-1H GBM1234-1H locus 59.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H GBM1234 locus 59.2 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.