*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, B73xCPI
(Reference Set)
Barley-Barley, Cali-sib x BowmanBC, QTL
Min.
Correspondences
Align Vertically
Stack
Maps Barley, B73xCPI-3H Hordeum-CxB-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, B73xCPI [ View Map Set Info ]
Map Name: Barley, B73xCPI-3H
Map Start: 0.00
Map Stop: 140.70
Features by Type:
155 locus
155 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 155.       Previous | of 7 | Next
Barley - Barley, B73xCPI - Barley, B73xCPI-3H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
GMS0116 locus 54.30 Barley - Barley, Lx41 - Hordeum-Lx41-3H GMS116 locus 80.60 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-3H GMS116 locus 90.50 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-3H GMS116 locus 62.88 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H GMS116 locus 82.70 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H GMS116 locus 70.81 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H GMS116 locus 70.81 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 GMS116 locus 70.81 () Automated name-based View Maps
Barley - Barley, AxHs/QTL - Hordeum-Pillen-3H GMS116 locus 79.00 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-3H GMS116 locus 78.00 () Automated name-based View Maps
HVM0060 locus 58.40 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 HVM60 locus 74.32 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-3H HVM60 locus 73.00 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-3H HVM60 locus 22.40 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H HVM60 locus 74.32 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H HVM60 locus 87.90 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H HVM60 locus 73.19 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H HVM60 locus 73.19 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H HVM60 locus 76.70 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-3H HVM60 locus 159.00 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-3H HVM60 locus 104.90 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-3H HVM60 locus 101.20 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-3H HVM60 locus 75.40 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-3H HVM60 locus 92.80 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-3H HVM60 locus 109.44 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-3H HVM60 locus 106.20 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H HVM60 locus 74.32 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H HVM60 locus 88.20 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-3H HVM60 locus 58.55 () Automated name-based View Maps
Bmag0225 locus 60.40 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 Bmag0225 locus 72.71 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-3H Bmag0225 locus 99.80 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-3H Bmag0225 locus 74.00 () Automated name-based View Maps
Barley - Barley, AxHs/QTL - Hordeum-Pillen-3H Bmag0225 locus 74.00 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H Bmag0225 locus 72.71 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H Bmag0225 locus 72.71 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-3H Bmag0225 locus 26.00 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-3H Bmag0225 locus 103.10 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-3H Bmag0225 locus 104.88 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H Bmag0225 locus 75.54 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H Bmag0225 locus 86.80 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-3H Bmag0225 locus 98.10 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H Bmag0225 locus 72.73 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H Bmag0225 locus 92.64 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-3H Bmag0225 locus 97.60 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-3H Bmag0225 locus 94.58 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-3H Bmag0225 locus 77.10 () Automated name-based View Maps
Bmag0841 locus 66.60 Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-3H Bmag841 locus 141.00 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H Bmag0841 locus 103.80 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H Bmag841 locus 91.21 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H Bmag841 locus 100.80 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H Bmag0841 locus 91.21 () Automated name-based View Maps
Bmag0606 locus 79.50 Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-3H Bmag0606 locus 107.00 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H Bmag0606 locus 112.50 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-3H Bmag0606 locus 125.00 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-3H Bmag0606 locus 70.30 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H Bmag0606 locus 101.77 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-3H Bmag0606 locus 92.18 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H Bmag0606 locus 100.78 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H Bmag0606 locus 100.78 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 Bmag0606 locus 100.78 () Automated name-based View Maps
Bmag0013 locus 104.20 Barley - Barley, LxHs - Hordeum-LxHs-3H Bmag0013 locus 141.00 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-3H Bmag0013 locus 87.90 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H Bmag0013 locus 131.14 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H Bmag0013 locus 113.70 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-3H Bmag0013 locus 138.90 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H Bmag0013 locus 118.41 () Automated name-based View Maps
Barley - Barley, AxHs/QTL - Hordeum-Pillen-3H Bmag0013 locus 142.00 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-3H Bmag0013 locus 123.18 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H Bmag0013 locus 131.14 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-3H Bmag0013 locus 145.09 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 Bmag0013 locus 131.14 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H Bmag0013 locus 126.40 () Automated name-based View Maps
scind02281 locus 106.90 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H scind02281 locus 166.12 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H scind02281 locus 137.40 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 scind02281 locus 135.32 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-3H scind02281 locus 180.05 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-3H scind02281 locus 165.90 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H scind02281 locus 135.32 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H scind02281 locus 135.32 () Automated name-based View Maps
Bmag0138.3Hb locus 114.10 No other positions
EBmac0541 locus 118.20 Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-3H EBmac0541 locus 126.10 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-3H EBmac541 locus 197.40 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-3H EBmac0541 locus 161.00 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-3H EBmac541 locus 112.00 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H EBmac0541 locus 137.16 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H EBmac0541 locus 137.16 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H EBmac541 locus 148.30 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H EBmac0541 locus 146.40 () Automated name-based View Maps
Hv0013GEIII locus 118.20 Barley - Barley, AxHs/QTL - Hordeum-Pillen-3H Hv13GEIII locus 3.00 () Automated name-based View Maps
HVM0062 locus 123.80 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H HVM62 locus 155.50 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-3H HVM62 locus 201.51 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H HVM62 locus 154.10 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H HVM62 locus 139.43 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-3H HVM62 locus 131.30 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-3H HVM62 locus 262.70 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H HVM62 locus 139.43 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-3H HVM62 locus 115.00 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-3H HVM62 locus 154.00 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H HVM62 locus 151.12 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H HVM62 locus 187.19 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-3H HVM62 locus 142.85 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-3H HVM62 locus 183.70 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-3H HVM62 locus 189.50 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-3H HVM62 locus 160.40 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H HVM62 locus 151.12 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 HVM62 locus 151.12 () Automated name-based View Maps
Bmag0853 locus 126.60 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H Bmag0853 locus 144.10 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H Bmag0853 locus 153.00 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H Bmag853 locus 144.10 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-3H Bmag853 locus 202.50 () Automated name-based View Maps
EBmac0708 locus 126.60 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H EBmac0708 locus 156.61 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 EBmac0708 locus 156.61 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H EBmac0708 locus 156.61 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-3H EBmac0708 locus 156.00 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-3H EBmac0708 locus 148.51 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H EBmac0708 locus 142.33 () Automated name-based View Maps
HVM0070 locus 127.90 No other positions
scssr25538 locus 140.70 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H scssr25538 locus 167.80 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H scssr25538 locus 162.74 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 scssr25538 locus 162.74 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H scssr25538 locus 162.74 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H scssr25538 locus 157.51 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-3H scssr25538 locus 212.20 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-3H scssr25538 locus 220.50 () Automated name-based View Maps
Bmac0029 locus 139.30 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H Bmac0029 locus 181.64 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H Bmac0029 locus 156.87 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H Bmac0029 locus 181.64 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H Bmac0029 locus 166.30 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-3H Bmac0029 locus 173.51 () Automated name-based View Maps
Barley - Barley, AxHs/QTL - Hordeum-Pillen-3H Bmac0029 locus 168.00 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 Bmac0029 locus 181.64 () Automated name-based View Maps
Bmag0346 locus 38.00 No other positions
Bmag0361 locus 44.10 No other positions
Bmag0478B locus 42.10 No other positions
Bmag0508A locus 44.80 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 Bmag0508A locus 54.29 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-3H Bmag0508A locus 46.83 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-3H Bmag0508A locus 61.00 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H Bmag0508A locus 52.56 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H Bmag0508A locus 54.29 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H Bmag0508A locus 54.29 () Automated name-based View Maps
Bmag0513 locus 46.10 No other positions
Bmag0567 locus 44.80 No other positions
Bmag0574 locus 44.80 No other positions
Bmag0601 locus 44.80 No other positions
Bmag0795 locus 46.10 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.