*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, B73xCPI
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Barley, B73xCPI-4H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, B73xCPI [ View Map Set Info ]
Map Name: Barley, B73xCPI-4H
Map Start: 0
Map Stop: 153.7
Features by Type:
122 locus
122 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 122.       Previous | of 5 | Next
Barley - Barley, B73xCPI - Barley, B73xCPI-4H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
cfe0181 locus 64.6 No other positions
GBM1509 locus 64.6 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H GBM1509 locus 82.1 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-4H GBM1509 locus 44.55 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H GBM1509 locus 63.21 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBM1509-4H locus 62.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H GBM1509 locus 75.5 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H GBM1509 locus 63.21 () Automated name-based View Maps
scind10455 locus 68.7 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H scind10455 locus 70.08 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-4H scind10455 locus 73.54 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 scind10455 locus 70.08 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H scind10455 locus 78 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H scind10455 locus 69.98 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-4H scind10455 locus 67.5 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H scind10455 locus 70.08 () Automated name-based View Maps
scind10455.4Ha locus 68.7 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H scind10455 locus 70.08 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H scind10455 locus 78 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-4H scind10455 locus 73.54 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 scind10455 locus 70.08 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-4H scind10455 locus 67.5 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H scind10455 locus 69.98 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H scind10455 locus 70.08 () Automated name-based View Maps
scind10455.4Hb locus 68.7 No other positions
HVM0068 locus 70.1 Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-4H HVM68 locus 47.36 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H HVM68 locus 76.2 () Automated name-based View Maps
Barley - Barley, AxHs/QTL - Hordeum-Pillen-4H HVM68 locus 45 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-4H HVM68 locus 138.1 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H HVM68 locus 62.52 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-4H HVM68 locus 152.8 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-4H HVM68 locus 45 () Automated name-based View Maps
Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-4 HVM68 locus 69 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H HVM68 locus 79.8 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-4H HVM68 locus 65.5 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H HVM68 locus 56.94 () Automated name-based View Maps
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-4H HVM68 locus 89.9 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-4H HVM68 locus 46.2 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 HVM68 locus 56.94 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-4H HVM68 locus 61.72 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H HVM68 locus 56.94 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H HVM68 locus 62.52 () Automated name-based View Maps
Barley - Barley, HxM/QTL - Hordeum-HxM-base-4H HVM68 locus 76.9 () Automated name-based View Maps
Bmac0310 locus 72.8 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H Bmac0310 locus 56.11 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-4H Bmac0310 locus 43 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-4H Bmac0310 locus 48.49 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 Bmac0310 locus 56.11 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H Bmac0310 locus 79.9 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-4H Bmac0310 locus 155.9 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-4H Bmac0310 locus 41.8 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H Bmac0310 locus 56.11 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H Bmac0310 locus 64.37 () Automated name-based View Maps
EBmac0775 locus 72.8 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H EBmac0775 locus 58.33 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-4H EBmac0775 locus 42 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-4H EBmac0775 locus 40.22 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 EBmac0775 locus 58.33 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H EBmac0775 locus 64.37 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H EBmac0775 locus 58.33 () Automated name-based View Maps
EBmac0658 locus 81.2 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 EBmac0658 locus 68.76 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H EBmac0658 locus 75.59 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-4H EBmac0658 locus 61.09 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-4H EBmac0658 locus 62 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H EBmac0658 locus 68.76 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H EBmac0658 locus 68.76 () Automated name-based View Maps
Barley - Barley, AxHs/QTL - Hordeum-Pillen-4H EBmac0658 locus 62 () Automated name-based View Maps
Bmac0134 locus 101 Barley - Barley, AxHs/QTL - Hordeum-Pillen-2H Bmac0134 locus 5 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 Bmac0134 locus 11.66 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H Bmac0134 locus 5 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H Bmac0134 locus 2.35 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H Bmac0134 locus 0 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmac0134 locus 10.87 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-2H Bmac0134 locus 3.1 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-2H Bmac0134 locus 1.44 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H Bmac0134 locus 11.66 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H Bmac0134 locus 10.87 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H Bmac0134 locus 11.66 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H Bmac0134 locus 7.9 () Automated name-based View Maps
Ebmac0635 locus 101 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H Ebmac0635 locus 93.06 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 Ebmac0635 locus 90.39 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H Ebmac0635 locus 93.06 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H Ebmac0635 locus 106.2 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H Ebmac0635 locus 90.39 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-4H Ebmac0635 locus 83.35 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-4H Ebmac0635 locus 82 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H Ebmac0635 locus 90.39 () Automated name-based View Maps
Ebmac0679 locus 101 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H Ebmac0679 locus 94.5 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H Ebmac0679 locus 91.72 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H Ebmac0679 locus 104.9 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H Ebmac0679 locus 91.72 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-4H Ebmac0679 locus 84.38 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H Ebmac0679 locus 94.5 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-4H Ebmac0679 locus 83 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 Ebmac0679 locus 91.72 () Automated name-based View Maps
EBmac0701 locus 101 Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-4H EBmac0701 locus 94.4 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-4H EBmac0701 locus 102.7 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 EBmac0701 locus 95.56 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-4H EBmac0701 locus 181.5 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-4H EBmac0701 locus 72.69 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H EBmac0701 locus 95.56 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H EBmac0701 locus 96.17 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H EBmac0701 locus 96.17 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H EBmac0701 locus 95.56 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-4H EBmac0701 locus 93.9 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H EBmac0701 locus 95.28 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H EBmac0701 locus 106.1 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-4H EBmac0701 locus 76 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-4H EBmac0701 locus 77.81 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-4H EBmac0701 locus 101.27 () Automated name-based View Maps
Ebmac0788 locus 101 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H Ebmac0788 locus 97.67 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H Ebmac0788 locus 99.52 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-4H Ebmac0788 locus 90 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-4H Ebmac0788 locus 118.4 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-4H Ebmac0788 locus 89.91 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H Ebmac0788 locus 99.52 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 Ebmac0788 locus 99.52 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H Ebmac0788 locus 97.67 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H Ebmac0788 locus 103.6 () Automated name-based View Maps
HvBTAI0003 locus 105.1 Barley - Barley consensus 2003 - Barley-consensus-2003-4H HvBTAI3 locus 63 () Automated name-based View Maps
TaCMD locus 105.1 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H TaCMD locus 115.6 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-4H TaCMD locus 63 () Automated name-based View Maps
HVMLOH0001A locus 106.4 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H HVMLOH1A locus 102.27 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H HVMLOH1A locus 120.1 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-4H HVMLOH1A locus 189.4 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-4H HVMLOH1A locus 88 () Automated name-based View Maps
Bmag0138.4H locus 128.9 No other positions
HdAMYB locus 149.5 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H HdAMYB locus 146.9 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-4H HdAMYB locus 203 () Automated name-based View Maps
Bmag0770 locus 150.8 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-1H Bmag770 locus 60.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-1H Bmag770 locus 60.42 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-1H Bmag0770 locus 60.42 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-1H Bmag770 locus 54.6 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-1H Bmag0770 locus 51.7 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-1H Bmag0770 locus 61.3 () Automated name-based View Maps
AF043094A locus 74.2 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H AF043094A locus 89.9 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-5H AF043094A locus 137 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H AF043094A locus 123.37 () Automated name-based View Maps
Bmac0048 locus 57.6 No other positions
Bmag0106 locus 27.4 No other positions
Bmag0218 locus 56.3 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H Bmag218 locus 72.2 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H Bmag218 locus 57.5 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H Bmag0218 locus 57.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H Bmag0218 locus 66.2 () Automated name-based View Maps
Bmag0333 locus 56.3 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.