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Map Set Barley-Barley, B73xCPI
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Maps Barley, B73xCPI-5H
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, B73xCPI [ View Map Set Info ]
Map Name: Barley, B73xCPI-5H
Map Start: 0
Map Stop: 175.1
Features by Type:
143 locus
143 Total

Map Features

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Items 51 to 75 of 143.       Previous | of 6 | Next
Barley - Barley, B73xCPI - Barley, B73xCPI-5H
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Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Bmag0637 locus 49.8 No other positions
Bmag0713 locus 65.4 No other positions
Bmag0819.5H locus 51.1 No other positions
EBmac0787 locus 51.1 No other positions
EBmac0965 locus 51.1 No other positions
EBmag0833 locus 21 No other positions
GBM1001 locus 162.3 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H GBM1001 locus 160.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1001-5H locus 181.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H GBM1001 locus 157.65 () Automated name-based View Maps
GBM1026 locus 51.1 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H GBM1026 locus 54.1 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1026-5H locus 53.1 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H GBM1026 locus 53.08 () Automated name-based View Maps
GBM1038 locus 69.5 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1038-5H locus 92 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H GBM1038 locus 85.27 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H GBM1038 locus 87.3 () Automated name-based View Maps
GBM1039 locus 51.1 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H GBM1039 locus 42.83 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1039-5H locus 45.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H GBM1039 locus 44.9 () Automated name-based View Maps
GBM1046.5H locus 51.1 No other positions
GBM1058 locus 99.2 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H GBM1058 locus 89.62 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-7H GBM1058-7H locus 84.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H GBM1058 locus 93.9 () Automated name-based View Maps
GBM1064 locus 162.3 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H GBM1064 locus 160.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1064-5H locus 181.7 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H GBM1064 locus 157.6 () Automated name-based View Maps
GBM1066.5H locus 51.1 Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-2H GBM1066 locus 39.8 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H GBM1066 locus 51.93 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H GBM1066 locus 49.9 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H GBM1066 locus 45.2 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-2H GBM1066 locus 41.6 () Automated name-based View Maps
GBM1068 locus 162.3 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H GBM1068 locus 58.2 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H GBM1068 locus 49.3 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-6H GBM1068 locus 61.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-6H GBM1068 locus 50.08 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-6H GBM1068 locus 58.6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-6H GBM1068-6H locus 44.3 () Automated name-based View Maps
GBM1398 locus 51.1 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H GBM1398 locus 53.8 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H GBM1398 locus 53.27 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1398-5H locus 51.9 () Automated name-based View Maps
GBM1399 locus 61.2 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1399-5H locus 74.2 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H GBM1399 locus 69.86 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H GBM1399 locus 67.8 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H GBM1399 locus 70.7 () Automated name-based View Maps
GBM1438 locus 99.2 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1438-5H locus 114.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H GBM1438 locus 108.8 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H GBM1438 locus 106.9 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H GBM1438 locus 104.74 () Automated name-based View Maps
GBM1463 locus 124.2 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H GBM1463 locus 130.55 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1463-5H locus 144 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H GBM1463 locus 129.4 () Automated name-based View Maps
GBM1470 locus 51.1 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H GBM1470 locus 129.4 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H GBM1470 locus 130.55 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1470-5H locus 143.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H GBM1470 locus 57 () Automated name-based View Maps
GBMS0014 locus 102 Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-1H GBMS14 locus 40.9 () Automated name-based View Maps
GBMS0068 locus 122.2 Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-5H GBMS68 locus 135.9 () Automated name-based View Maps
GBMS0119 locus 120.1 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H GBMS119 locus 122.09 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H GBMS119 locus 122.09 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-5H GBMS119 locus 161 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H GBMS119 locus 128.3 () Automated name-based View Maps
GBMS0141 locus 120.1 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H GBMS141 locus 93.04 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H GBMS141 locus 94.2 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H GBMS141 locus 136 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H GBMS141 locus 93.04 () Automated name-based View Maps
Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-7H GBMS141 locus 84.8 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-7H GBMS141 locus 111.9 () Automated name-based View Maps
HVACLI locus 51.1 Barley - Barley consensus 2003 - Barley-consensus-2003-5H HvACLIa locus 31.4 () Automated name-based View Maps

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