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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, CxS
(Reference Set)
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Correspondences
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Maps Hordeum-CxS-1H
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
chromband
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, CxS [ View Map Set Info ]
Map Name: Hordeum-CxS-1H
Map Start: 0
Map Stop: 251.07
Features by Type:
1 chromband
32 locus
33 Total

Map Features

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Items 26 to 33 of 33.       Previous | of 2
Barley - Barley, CxS - Hordeum-CxS-1H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
WG789(A) locus 134.6 Barley - Barley, CxH - Hordeum-CxH-7H WG789(A) locus 38.62 () Automated name-based View Maps
ksuA3(C) locus 96.45 Barley - Barley, GxH - Hordeum-GxH-3H ksuA3(C) locus 86.12 () Automated name-based View Maps
BCD340(A) locus 100.99 Barley - Barley, GxH - Hordeum-GxH-1H BCD340(A) locus 235.1 () Automated name-based View Maps
BCD340(B) locus 107.06 Barley - Barley, GxH - Hordeum-GxH-6H BCD340(B) locus 88.14 () Automated name-based View Maps
WG789(D) locus 152.29 No other positions
BCD808(C) locus 222.47 No other positions
BCD265(C) locus 222.47 No other positions
Centromere chromband 101 - 107.1 Barley - Barley, CxS - Hordeum-CxS-4H Centromere chromband 62 - 65.5 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-3H Centromere chromband 52.2 - 62 () Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-6H Centromere chromband -6.9 - 6.9 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-5H Centromere chromband -0.5 - 1 () Automated name-based View Maps
Barley - Barley, CxS - Hordeum-CxS-3H Centromere chromband 46.1 - 107.6 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-7H Centromere chromband 9.6 - 16.4 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-1H Centromere chromband -9.5 - 4.9 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-2H Centromere chromband 76.9 - 80.9 () Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-2H Centromere chromband -10.6 - 10.6 () Automated name-based View Maps
Barley - Barley, CxS - Hordeum-CxS-7H Centromere chromband 73.3 - 96.3 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-4H Centromere chromband -0.1 - 0.1 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-6H Centromere chromband -3.3 - 2.6 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-7H Centromere chromband 106.8 - 114.3 () Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-5H Centromere chromband -0.5 - 0.6 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-5H Centromere chromband 107.6 - 108.5 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-2H Centromere chromband -0.8 - 0.6 () Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-7H Centromere chromband -1.9 - 1.8 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-4H Centromere chromband 74.6 - 87.6 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-6H Centromere chromband 81.4 - 90.2 () Automated name-based View Maps
Barley - Barley, CxS - Hordeum-CxS-6H Centromere chromband 84.6 - 117.9 () Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-4H Centromere chromband -16.9 - 16.9 () Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-1H Centromere chromband -18.7 - 18.7 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-6H Centromere chromband 31 - 79.6 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-1H Centromere chromband 41.9 - 65.4 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-2H Centromere chromband 94.6 - 115 () Automated name-based View Maps
Barley - Barley, CxS - Hordeum-CxS-2H Centromere chromband 80.2 - 83 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-1H Centromere chromband 45.5 - 59 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-4H Centromere chromband 69.6 - 98.7 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-3H Centromere chromband 14.1 - 53 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-7H Centromere chromband -0.1 - 0.1 () Automated name-based View Maps
Barley - Barley, CxS - Hordeum-CxS-5H Centromere chromband 5 - 50.1 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H Centromere chromband -0.1 - 0.1 () Automated name-based View Maps
Barley - Barley, IxT/QTL - Hordeum-IxT/Q-3H Centromere chromband -56.7 - 56.7 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-5H Centromere chromband 45.3 - 47.1 () Automated name-based View Maps

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