*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, DxM, Dhn genes
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-DxM-Dnh-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, DxM, Dhn genes [ View Map Set Info ]
Map Name: Hordeum-DxM-Dnh-3H
Map Start: 0
Map Stop: 198.7
Features by Type:
21 locus
21 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 21 of 21.
Barley - Barley, DxM, Dhn genes - Hordeum-DxM-Dnh-3H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
abc174 locus 171.2 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 abc174 locus 138.62 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H abc174 locus 77 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H abc174 locus 60.4 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H abc174 locus 171 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H abc174 locus 132.39 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H abc174 locus 143.7 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H abc174 locus 138.62 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-3H abc174 locus 148.05 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H abc174 locus 139.09 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H abc174 locus 104.3 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H abc174 locus 129.6 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H abc174 locus 160.2 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B abc174 locus 111.35 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H abc174 locus 132.39 () Automated name-based View Maps
Barley - Barley, HxT basemap - Hordeum-HxT-base-3H abc174 locus 120.1 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-3H abc174 locus 157.6 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H abc174 locus 222.15 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H abc174 locus 138.62 () Automated name-based View Maps
ABG460 locus 45.7 Barley - Barley, CxS - Hordeum-CxS-3H ABG460 locus 0 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-5H ABG460 locus 267.11 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H ABG460 locus -16.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H ABG460 locus 30.26 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H ABG460 locus 30 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-5H ABG460 locus 234.19 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H ABG460 locus 42.7 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H ABG460 locus 27.11 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-3H ABG460 locus 43.01 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H ABG460 locus 27.11 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H ABG460 locus 28.13 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H ABG460 locus 30 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 ABG460 locus 27.11 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-5H ABG460 locus 93.1 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-3H ABG460 locus 41.3 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H ABG460 locus 21.3 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H ABG460 locus 35.1 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H ABG460 locus 41.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A abg460 locus 22.3 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H ABG460 locus 45.7 () Automated name-based View Maps
Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-3H ABG460-3H locus 4.22 () Automated name-based View Maps
ABC176 locus 78.6 Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H ABC176 locus 92.7 () Automated name-based View Maps
Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-3H ABC176-3H locus 23.06 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 ABC176 locus 63.55 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H ABC176 locus 65.76 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H ABC176 locus 76.8 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H ABC176 locus 63.55 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H ABC176 locus 63.55 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H ABC176 locus 9.3 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H ABC176 locus 92.7 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H ABC176 locus 53.3 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H ABC176 locus 62.6 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H ABC176 locus 79.3 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H ABC176 locus 64.69 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H ABC176 locus 78.5 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H ABC176 locus 65.76 () Automated name-based View Maps
ABG4 locus 150 Barley - Barley, IxF - Hordeum-Graner2-3H ABG4 locus 105.6 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H ABG4 locus 87.1 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H ABG4 locus 128.6 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-3H ABG4 locus 146.51 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H ABG004 locus 118.86 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-3H ABG4 locus 139.8 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H ABG4 locus 149.9 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-3H ABG4 locus 98.9 () Automated name-based View Maps
Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-3H ABG4 locus 78.8 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-3H ABG4 locus 110.35 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H ABG4 locus 111.42 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H ABG4 locus 55.9 () Automated name-based View Maps
iEst4 locus 198.7 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H iEst4 locus 172 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H iEst4 locus 198.5 () Automated name-based View Maps
saflp229 locus 0 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp229 locus 0 () Automated name-based View Maps
saflp44 locus 4.4 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp44 locus 4.4 () Automated name-based View Maps
saflp133 locus 11 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp133 locus 11 () Automated name-based View Maps
saflp97 locus 17.7 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp97 locus 17.7 () Automated name-based View Maps
saflp19 locus 26.8 No other positions
saflp54 locus 36.9 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp54 locus 36.9 () Automated name-based View Maps
saflp38 locus 41.3 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp38 locus 41.3 () Automated name-based View Maps
saflp55 locus 70.8 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp55 locus 70.7 () Automated name-based View Maps
saflp35 locus 105 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp35 locus 104.9 () Automated name-based View Maps
saflp168 locus 117.5 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp168 locus 117.4 () Automated name-based View Maps
saflp53 locus 123.1 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp53 locus 123 () Automated name-based View Maps
saflp106 locus 133.5 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp106 locus 133.4 () Automated name-based View Maps
Dhn10 locus 138.1 No other positions
saflp70 locus 153.4 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp70 locus 153.3 () Automated name-based View Maps
saflp24 locus 156.8 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp24 locus 156.7 () Automated name-based View Maps
saflp175 locus 160.1 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H saflp175 locus 160 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.