*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, HN x H602, Sato2009
(Reference Set) 		Barley-Barley, Consensus 2006, Marcel
Min.
Correspondences
Align Vertically
Stack
Maps Hv-HNxH602-6H Hv-Consensus2006-Marcel-6H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
bin
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, HN x H602, Sato2009 [ View Map Set Info ]
Map Name: Hv-HNxH602-6H
Map Start: 0.00
Map Stop: 207.30
Features by Type:
327 locus
327 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 327.       of 14 | Next
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-6H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
MWG620 locus 0.00 Barley - Barley, OWB - Hordeum-OWB-6H MWG620 locus 4.00 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-6H MWG620 locus 6.70 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-6H MWG620 locus -53.30 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-6H MWG620 locus 6.60 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H MWG620 locus 7.20 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-6H MWG620 locus 6.89 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-6H MWG620 locus 6.60 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-6H MWG620 locus 6.80 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-6H MWG620 locus 4.80 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-6H MWG620 locus 7.10 () Automated name-based View Maps
Barley - Barley, VxHs - Hordeum-Graner1-6H MWG620 locus 19.00 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-6H MWG620 locus 0.00 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-6H MWG620-6H locus 2.17 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-6H MWG620 locus 0.00 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H MWG620 locus 6.10 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-6 MWG620 locus 15.19 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-6H MWG620 locus 8.60 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-6H MWG620 locus 15.19 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-6H MWG620 locus 15.19 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-6H MWG620 locus 0.00 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-6H MWG620 locus 6.90 () Automated name-based View Maps
MWG897 locus 204.70 Barley - Barley, BinMap 2005 - Hordeum-Bins-6H MWG897 locus 144.00 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-6H MWG897 locus 129.02 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-6H MWG897 locus 126.87 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-6H MWG897 locus 145.21 () Automated name-based View Maps
Barley - H. bulbosum, PB1 x PB11 - Hbulbosum-PB1xPB11-6 Xmwg897 locus 89.00 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-6H MWG897 locus 118.40 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-6H MWG897 locus 123.50 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-6H MWG897 locus 126.00 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H MWG897 locus 127.10 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-6H MWG897 locus 67.90 () Automated name-based View Maps
HVM31 locus 94.70 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-6H HVM31 locus 60.90 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-6H HVM31 locus 68.00 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-6H HVM31 locus 60.90 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H HVM31 locus 60.00 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-6H HVM31 locus 103.00 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H HVM31 locus 64.13 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-6H HVM31 locus 68.68 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-6H HVM31 locus 72.81 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-6H HVM31 locus 72.81 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-6H HVM31 locus 68.70 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-6 HVM31 locus 72.81 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-6H HVM31 locus 21.80 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-6H HVM31 locus 64.00 () Automated name-based View Maps
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-6H HVM31-6H locus 34.91 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-6H HVM31 locus 18.24 () Automated name-based View Maps
MWG2218 locus 31.90 Barley - Barley, IxF - Hordeum-Graner2-6H MWG2218 locus 13.40 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H MWG2218 locus 18.90 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-6H MWG2218 locus 10.90 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-6H MWG2218 locus 21.00 () Automated name-based View Maps
Barley - Barley, AxK - Hordeum-AxK-6H MWG2218 locus -1.60 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-6H MWG2218 locus 18.46 () Automated name-based View Maps
Bmac316 locus 17.40 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H Bmac316 locus 4.30 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-6H Bmac0316 locus 9.52 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-6H Bmac316 locus 8.40 () Automated name-based View Maps
Bmac40 locus 179.60 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H Bmac40 locus 68.20 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-6H Bmac0040 locus 129.82 () Automated name-based View Maps
k04740 locus 12.10 No other positions
k08584 locus 12.10 No other positions
k08929 locus 12.60 No other positions
k07242 locus 13.10 No other positions
k00900 locus 14.20 No other positions
k06988 locus 15.30 No other positions
k08208 locus 15.30 No other positions
k06269 locus 16.40 No other positions
k07625 locus 16.40 No other positions
k06710 locus 16.40 No other positions
k00720 locus 16.90 No other positions
k03905 locus 17.40 No other positions
k03104 locus 17.40 No other positions
k08684 locus 17.40 No other positions
k03508 locus 19.60 No other positions
k00506 locus 19.60 No other positions
k08131 locus 20.70 No other positions
k01172 locus 23.60 No other positions
k00961 locus 23.60 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.