*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, HxT basemap
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-HxT-base-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, HxT basemap [ View Map Set Info ]
Map Name: Hordeum-HxT-base-3H
Map Start: 0
Map Stop: 154.3
Features by Type:
15 locus
15 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 15 of 15.
Barley - Barley, HxT basemap - Hordeum-HxT-base-3H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
cdo395 locus 5.7 Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg03 CDO395 locus 134.4 () Automated name-based View Maps
Oat - Oat, OxT - Oat-OxT-2 cdo395 locus 85.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H cdo395 locus 30.7 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H cdo395 locus 15.4 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H cdo395 locus 27 () Automated name-based View Maps
Wheat D - T.tauschii - Tt-Gill-3D cdo395 locus 141.2 () Automated name-based View Maps
Barley - Barley, VGxTP - Hordeum-Giese2-3H cdo395 locus 88 () Automated name-based View Maps
Oat - Oat-2002-OxT-QTL - Oat-2002-OxT-QTL_2 cdo395 locus 81.5 (cM) Automated name-based View Maps
Oat - Oat, MxN, genetic 2005 - Oat-MxN_2005-19 cdo395 locus 30.4 () Automated name-based View Maps
Oat - Oat-2007-OxT-PcQTL - Oat-2007-OxT_2 CDO395 locus 86.6 (cM) Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H cdo395 locus -30.5 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-3 CDO395 locus 134.4 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B cdo395 locus 36.23 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H cdo395 locus 5.6 () Automated name-based View Maps
abg471 locus 17.2 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H abg471 locus 30.31 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-3H abg471 locus 30.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H abg471 locus 44.1 () Automated name-based View Maps
Wheat ABD - 3B Physical - Physical-3B abg471 locus 46.09 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H abg471 locus 32.7 () Automated name-based View Maps
Barley - Barley, AxK - Hordeum-AxK-3H abg471 locus 35.3 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H abg471 locus 38 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H abg471 locus 30.31 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 abg471 locus 30.31 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H abg471 locus 30.96 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A abg471 locus 21.2 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-3H abg471 locus 71.22 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H abg471 locus 33.14 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-3H abg471 locus 33.3 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H abg471 locus 44.3 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-3H abg471 locus 32.6 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-3H abg471 locus 35.4 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H abg471 locus 17.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3B abg471 locus 30.7 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H abg471 locus 32.7 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H abg471 locus -19 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H abg471 locus 23.7 () Automated name-based View Maps
abc174 locus 120.1 Wheat ABD - 3B Physical - Physical-3B abc174 locus 111.35 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H abc174 locus 77 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H abc174 locus 160.2 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-3H abc174 locus 157.6 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H abc174 locus 171 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H abc174 locus 222.15 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 abc174 locus 138.62 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H abc174 locus 104.3 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H abc174 locus 138.62 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H abc174 locus 132.39 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H abc174 locus 139.09 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H abc174 locus 129.6 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H abc174 locus 143.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H abc174 locus 132.39 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-3H abc174 locus 148.05 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H abc174 locus 60.4 () Automated name-based View Maps
Barley - Barley, DxM, Dhn genes - Hordeum-DxM-Dnh-3H abc174 locus 171.2 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H abc174 locus 138.62 () Automated name-based View Maps
ABC171 locus 0 Barley - Barley consensus - Barley-Consensus-3H ABC171 locus -29.4 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-3H ABC171 locus 16.6 () Automated name-based View Maps
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-3H ABC171 locus 24.8 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H ABC171 locus 9.6 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H ABC171 locus 0 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H ABC171 locus 16.3 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H ABC171A locus 144.8 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-3H ABC171 locus 14.08 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-3H ABC171 locus 16.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H ABC171 locus 22.5 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H ABC171 locus 16.3 () Automated name-based View Maps
MWG847 locus 92.9 Barley - Barley, HxT - Hordeum-NABGMP2-3H MWG847 locus 31.7 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H MWG847 locus 48.8 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG847 locus 130 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG847 locus 107.19 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG847 locus 118.1 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H MWG847 locus 107.19 () Automated name-based View Maps
Wheat ABD - Triticeae consensus - Triticeae-Sorrells-3-update Xmwg847-3 locus 72.4 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-3H MWG847 locus 136.5 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG847 locus 80.9 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG847 locus 101.1 () Automated name-based View Maps
MWG2040 locus 124.8 Barley - Barley consensus - Barley-Consensus-3H MWG2040 locus 86.9 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-5H MWG2040B locus 53.1 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG2040 locus 109.9 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H MWG2040 locus 65.6 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG2040 locus 141.5 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG2040 locus 162 () Automated name-based View Maps
ABC166 locus 138.2 Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-3H ABC166 locus 163.04 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H ABC166 locus 150.43 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H ABC166 locus 146.66 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H ABC166 locus 248.51 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H ABC166 locus 86.4 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H ABC166 locus 150.43 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H ABC166 locus 150.88 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H ABC166 locus 190.8 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H ABC166 locus 170.2 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 ABC166 locus 150.43 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H ABC166-3H locus 143.31 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-3H ABC166 locus 199.7 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H ABC166 locus 190.8 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H ABC166 locus 118.7 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H ABC166 locus 90.3 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H ABC166 locus 146.66 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H ABC166 locus 157.5 () Automated name-based View Maps
MWG838 locus 147.9 Barley - Barley, SxM basemap - Hordeum-SxM-base-3H MWG838 locus 172.1 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG838 locus 171.2 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG838 locus 123.1 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG838 locus 166 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG838 locus 158.8 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 MWG838 locus 150.97 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H MWG838 locus 163.8 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-3H MWG838 locus 163.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG838 locus 148.82 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-3H MWG838 locus 211.5 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H MWG838 locus 95 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H MWG838 locus 151.42 () Automated name-based View Maps
Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-3H MWG838 locus 145.3 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H MWG838 locus 150.97 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H MWG838 locus 150.97 () Automated name-based View Maps
Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-3H MWG838-3H locus 129.52 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H MWG838 locus 97.1 () Automated name-based View Maps
ABC172 locus 154.3 Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-3H ABC172 locus 182.4 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-3H ABC172 locus 202 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-3H ABC172 locus 220.2 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-3H ABC172 locus 175.1 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H ABC172 locus 205 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H ABC172 locus 101.6 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H ABC172 locus 161.98 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-3H ABC172B locus 169.2 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-3H ABC172 locus 167.55 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 ABC172 locus 161.87 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H ABC172 locus 131.4 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H ABC172 locus 161.87 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H ABC172 locus 107.8 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H ABC172 locus 262.03 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A abc172 locus 17.1 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-3H ABC172 locus 185 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H ABC172 locus 157.51 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H ABC172 locus 181.3 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-3H ABC172 locus 212.2 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-3H ABC172 locus 177.8 () Automated name-based View Maps
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-3H ABC172 locus 177.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H ABC172 locus 167.8 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H ABC172 locus 205 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H ABC172 locus 157.51 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-3H ABC172 locus 220.4 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H ABC172 locus 206.91 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H ABC172 locus 181.4 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H ABC172 locus 161.87 () Automated name-based View Maps
ABG609B locus 141.9 Barley - Barley consensus 2 - Barley-Consensus2-3H ABG609B locus 120.4 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H ABG609B locus 178 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H ABG609B locus 91.4 () Automated name-based View Maps
ABG709 locus 133.4 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H ABG709 locus 163 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H ABG709 locus 114.9 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H ABG709 locus 73.8 () Automated name-based View Maps
WG222 locus 151.5 Barley - Barley, HxT - Hordeum-NABGMP2-3H WG222 locus 101.8 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H WG222 locus 129.4 () Automated name-based View Maps
Wheat D - T.tauschii - Tt-Gill-1D WG222 locus 192.9 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-2H WG222A locus 44 () Automated name-based View Maps
ABG607 locus 89.5 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H ABG607 locus 133 () Automated name-based View Maps
Ugp1 locus 59.7 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H Ugp1 locus 98 () Automated name-based View Maps
Ugp2 locus 25.2 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H Ugp2 locus 36 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.