*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Igri x Franka, SSR
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-IxF-SSR-4H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Igri x Franka, SSR [ View Map Set Info ]
Map Name: Hordeum-IxF-SSR-4H
Map Start: 0
Map Stop: 141
Features by Type:
15 locus
15 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 15 of 15.
Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-4H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
WG622 locus 0 Barley - Barley, CxH - Hordeum-CxH-4H WG622 locus 0 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-4H WG622 locus 0.8 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-4H WG622 locus -59.1 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-4H WG622 locus 2.58 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H WG622 locus 3.88 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-4H WG622 locus 0 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-4H WG622a locus 30.1 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-4H WG622 locus 0 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-4H WG622 locus 0 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H WG622 locus 13.1 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-4H WG622 locus 0 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H WG622 locus 14.6 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H WG622 locus 1.34 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-4H WG622 locus 1.4 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-4H WG622 locus 0.7 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-4H WG622 locus 1.4 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-4H WG622 locus 0 () Automated name-based View Maps
Wheat D - T.tauschii - Tt-Gill-4D WG622 locus 0 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 WG622 locus 1.34 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-4H WG622 locus 1 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-4H WG622 locus 1.2 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H WG622 locus 1.34 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-4H WG622 locus 1.4 () Automated name-based View Maps
Barley - Barley, HxT basemap - Hordeum-HxT-base-4H WG622 locus 6.2 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-4H WG622 locus 0.6 () Automated name-based View Maps
MWG58 locus 63.4 Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-4H MWG58 locus 72.6 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-4H MWG58 locus 61.1 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-4H MWG58 locus 52.8 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-4H MWG58 locus -0.6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H MWG58 locus 56.58 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-4H MWG58 locus 51.91 () Automated name-based View Maps
Barley - Barley, VxHs - Hordeum-Graner1-4H MWG58 locus 160 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-4H MWG58 locus 89.6 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H MWG058 locus 50.22 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H MWG58 locus 68.1 () Automated name-based View Maps
ABG472 locus 81.9 Barley - Barley, GxH - Hordeum-GxH-4H ABG472 locus 91.75 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-4H ABG472 locus 86.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H ABG472 locus 91.1 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-4H ABG472 locus 73.2 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-4H ABG472 locus 53.8 () Automated name-based View Maps
Barley - Barley, HxT basemap - Hordeum-HxT-base-4H ABG472 locus 110.8 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H ABG472 locus 82.06 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-4H ABG472 locus 96.5 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-4H ABG472 locus 81 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H ABG472 locus 76.98 () Automated name-based View Maps
Barley - Barley, DxM, Dhn genes - Hordeum-DxM-Dnh-4H ABG472 locus 36.9 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-4H ABG472 locus 100.4 () Automated name-based View Maps
Barley - Barley, Dicktoo x Morex - Hordeum-DxM-4H ABG472 locus 36.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H ABG472 locus 97.7 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-4H ABG472 locus 79.4 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-4H ABG472 locus 46.2 () Automated name-based View Maps
Barley - Barley, HxM/QTL - Hordeum-HxM-base-4H ABG472 locus 89.9 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-4H ABG472 locus 76.49 () Automated name-based View Maps
Barley - Barley, AxK - Hordeum-AxK-4H ABG472A locus 49.2 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-4H ABG472 locus 96.6 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-4H ABG472 locus 83.1 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H ABG472 locus 80.3 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-4H ABG472 locus 75.7 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-4H ABG472 locus 120.5 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-4H ABG472 locus 84.6 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-4H ABG472 locus 77.36 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-4H ABG472 locus 78.4 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-4H ABG472 locus 96.5 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 ABG472 locus 76.98 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-4H ABG472 locus 21.9 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-4H ABG472 locus 81.6 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-4H ABG472 locus 162.4 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H ABG472 locus 76.98 () Automated name-based View Maps
MWG635a locus 46.1 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H MWG635a locus 34.11 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H MWG635a locus 39.95 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-4H MWG635a locus 37.5 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-4H MWG635a locus 41 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-4H MWG635a locus 35.39 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-4H MWG635a locus 41 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-5H MWG635a locus 48.7 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-4H MWG635a locus 38 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-4H MWG635a locus 37.9 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-4H MWG635a locus 42.4 () Automated name-based View Maps
Barley - Barley, HxT basemap - Hordeum-HxT-base-5H MWG635a locus 47.7 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-4H MWG635a locus 33.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H MWG635a locus 47.4 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 MWG635a locus 34.11 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H MWG635a locus 34.11 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-4H MWG635a locus 45.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H MWG635a locus 49.5 () Automated name-based View Maps
ABG500b locus 110.1 Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-4H ABG500b locus 119.9 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-4H ABG500b locus 105.1 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H ABG500b locus 108.6 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-4H ABG500b locus 118.3 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-4H ABG500b locus 94.5 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-4H ABG500b locus 99.8 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-4H ABG500b locus 94.9 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-4H ABG500b locus 97.1 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H ABG500b locus 94.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H ABG500b locus 116.1 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-4H ABG500b locus 118.3 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 ABG500b locus 94.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H ABG500b locus 98.12 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H ABG500b locus 94.7 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-4H ABG500b locus 119.5 () Automated name-based View Maps
GBMS114 locus 34.5 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H GBMS114 locus 26.49 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H GBMS114 locus 36 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-4H GBMS114 locus 22.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H GBMS114 locus 26.49 () Automated name-based View Maps
GBMS150 locus 65.7 Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-4H GBMS150 locus 77.7 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H GBMS150 locus 68.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H GBMS150 locus 59.79 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H GBMS150 locus 59.79 () Automated name-based View Maps
GBMS190 locus 81.9 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H GBMS190 locus 91.1 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H GBMS190 locus 80.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H GBMS190 locus 80.3 () Automated name-based View Maps
GBMS128a locus 141 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H GBMS128a locus 120.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H GBMS128a locus 130.3 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H GBMS128a locus 120.5 () Automated name-based View Maps
GBMS15 locus 68.8 Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-4H GBMS15 locus 87.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H GBMS015 locus 66.75 () Automated name-based View Maps
Bmag138 locus 139.4 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H Bmag0138a locus 45.24 () Automated name-based View Maps
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-4H Bmag138 locus 157.7 () Automated name-based View Maps
GBMS28 locus 1.6 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H GBMS028 locus 4.93 () Automated name-based View Maps
GBMS29 locus 61.1 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H GBMS029 locus 51.2 () Automated name-based View Maps
GBMS49 locus 63.4 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H GBMS049 locus 58.71 () Automated name-based View Maps
GBMS81 locus 63.4 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H GBMS081 locus 58.96 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.