*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, IxF, Stein2006
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hv-IxF-Stein-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, IxF, Stein2006 [ View Map Set Info ]
Map Name: Hv-IxF-Stein-3H
Map Start: 0
Map Stop: 137.57
Features by Type:
49 locus
49 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 49.       of 2 | Next
Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-3H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
ABC176-3H locus 23.06 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H ABC176 locus 78.5 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H ABC176-3H locus 66.67 () Automated name-based View Maps
Barley - Barley, DxM, Dhn genes - Hordeum-DxM-Dnh-3H ABC176 locus 78.6 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H ABC176 locus 9.3 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H ABC176 locus 62.6 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H ABC176 locus 53.3 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H ABC176 locus 79.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H ABC176 locus 65.76 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H ABC176 locus 92.7 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 ABC176 locus 63.55 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H ABC176 locus 63.55 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H ABC176 locus 65.76 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H ABC176 locus 64.69 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H ABC176 locus 63.55 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H ABC176 locus 92.7 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H ABC176 locus 76.8 () Automated name-based View Maps
ABG004-3H locus 67.36 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H ABG004-3H locus 108.07 () Automated name-based View Maps
ABG460-3H locus 4.22 Barley - Barley, Dicktoo x Morex - Hordeum-DxM-3H ABG460 locus 45.7 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-3H ABG460 locus 30 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-5H ABG460 locus 267.11 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-3H ABG460 locus 43.01 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H ABG460 locus 27.11 () Automated name-based View Maps
Barley - Barley, CxS - Hordeum-CxS-3H ABG460 locus 0 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H ABG460 locus 30.26 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-5H ABG460 locus 234.19 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H ABG460 locus 21.3 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H ABG460 locus -16.9 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H ABG460-3H locus 28.28 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-5H ABG460 locus 93.1 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-3H ABG460 locus 41.3 () Automated name-based View Maps
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-3H ABG460-3H locus 43.68 () Automated name-based View Maps
Barley - Barley, DxM, Dhn genes - Hordeum-DxM-Dnh-3H ABG460 locus 45.7 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H ABG460 locus 28.13 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 3A abg460 locus 22.3 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H ABG460 locus 35.1 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H ABG460 locus 27.11 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H ABG460 locus 42.7 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 ABG460 locus 27.11 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H ABG460 locus 41.7 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-3H ABG460 locus 30 () Automated name-based View Maps
ABG495b-3H locus 116.93 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H ABG495b-3H locus 137.54 () Automated name-based View Maps
BCD828-3H locus 16.35 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H BCD828-3H locus 52.45 () Automated name-based View Maps
MWG555b-3H locus 30.25 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H MWG555b-3H locus 78.07 () Automated name-based View Maps
MWG571a-3H locus 34.63 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H MWG571a-3H locus 85.66 () Automated name-based View Maps
MWG838-3H locus 129.52 Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H MWG838 locus 151.42 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG838 locus 171.2 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG838 locus 166 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-3H MWG838 locus 97.1 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 MWG838 locus 150.97 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG838 locus 123.1 () Automated name-based View Maps
Barley - Barley, Igri x Franka, SSR - Hordeum-IxF-SSR-3H MWG838 locus 145.3 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-3H MWG838 locus 163.7 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-3H MWG838 locus 172.1 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H MWG838 locus 150.97 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H MWG838 locus 150.97 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-3H MWG838 locus 211.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG838 locus 148.82 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H MWG838 locus 163.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG838 locus 158.8 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H MWG838 locus 95 () Automated name-based View Maps
Barley - Barley, HxT basemap - Hordeum-HxT-base-3H MWG838 locus 147.9 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H MWG838-3H locus 143.25 () Automated name-based View Maps
MWG844b-3H locus 16.35 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-3H MWG844b-3H locus 62.9 () Automated name-based View Maps
MWG883-3H locus 90.03 Barley - Barley consensus 2 - Barley-Consensus2-3H MWG883 locus 101.9 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H MWG883 locus 171.6 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 MWG883 locus 140.44 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-3H MWG883 locus 169.4 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H MWG883 locus 140.44 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-3H MWG883 locus 144.9 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H MWG883 locus 140.44 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG883 locus 156 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-3H MWG883 locus 73.7 () Automated name-based View Maps
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-3H MWG883-3H locus 157.27 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG883 locus 126.6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG883 locus 128.99 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-3H MWG883 locus 185.69 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG883 locus 139.7 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-3H MWG883 locus 171.8 () Automated name-based View Maps
MWG884-3H locus 67.33 Barley - Barley consensus - Barley-Consensus-3H MWG884 locus 54.4 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG884 locus 105.6 () Automated name-based View Maps
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-3H MWG884-3H locus 142.97 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-3H MWG884 locus 86.1 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-3H MWG884 locus 141.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG884 locus 122.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG884 locus 111.26 () Automated name-based View Maps
MWG2266-3H locus 0 Barley - Barley, BinMap 2005 - Hordeum-Bins-3H MWG2266 locus 39 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-3H MWG2266 locus 38.2 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H MWG2266 locus 38.6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H MWG2266 locus 26.32 () Automated name-based View Maps
GBR0086a-3H locus 16.35 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-3H GBR0086a-3H locus 69.44 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H GBR0086a-3H locus 50.83 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBR0086a-3H locus 69 () Automated name-based View Maps
GBS0073-3H locus 16.35 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBS0073-3H locus 68.9 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H GBS0073-3H locus 50.83 () Automated name-based View Maps
GBR1660-3H locus 16.35 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBR1660-3H locus 68.5 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-3H GBR1660-3H locus 52.45 () Automated name-based View Maps
GBM1056-3H locus 90.03 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBM1056-3H locus 146.7 () Automated name-based View Maps
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-3H GBM1056-3H locus 157.22 () Automated name-based View Maps
GBM1059-3H locus 90.03 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-3H GBM1059-3H locus 157.22 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBM1059-3H locus 146.7 () Automated name-based View Maps
GBR1425-3H locus 124.13 Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-3H GBR1425-3H locus 185.07 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBR1425-3H locus 172.8 () Automated name-based View Maps
GBS0879-3H locus 137.57 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBS0879-3H locus 175.9 () Automated name-based View Maps
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-3H GBS0879-3H locus 186.89 () Automated name-based View Maps
GBR0266-3H locus 2.21 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBR0266-3H locus 46.9 () Automated name-based View Maps
GBR1063-3H locus 4.14 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBR1063-3H locus 50.1 () Automated name-based View Maps
GBM1031-3H locus 16.35 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBM1031-3H locus 68.8 () Automated name-based View Maps
GBR0079b-3H locus 16.35 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBR0079b-3H locus 68.6 () Automated name-based View Maps
GBR0185-3H locus 16.35 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBR0185-3H locus 68.9 () Automated name-based View Maps
GBR0495-3H locus 16.35 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-3H GBR0495-3H locus 68.8 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.