*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Lina x H.spont, SNP
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-LiHs-SNP-2H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Lina x H.spont, SNP [ View Map Set Info ]
Map Name: Hordeum-LiHs-SNP-2H
Map Start: 0
Map Stop: 96.63
Features by Type:
69 locus
69 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 69.       Previous | of 3 | Next
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
HVM63 locus 3.13 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H HVM63 locus 67.3 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H HVM63 locus 67.3 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 HVM63 locus 67.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H HVM63 locus 67.01 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H HVM63 locus 50 () Automated name-based View Maps
HVM26 locus 3.13 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H HVM26 locus 67.25 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H HVM26 locus 67.01 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H HVM26 locus 50 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H HVM26 locus 101.5 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H HVM26 locus 67.25 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-2H HVM026 locus 73 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 HVM26 locus 67.25 () Automated name-based View Maps
Bmac0132 locus 63.26 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmac0132 locus 67.01 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H Bmac0132 locus 67.36 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H Bmac0132 locus 50 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H Bmac0132 locus 67.36 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 Bmac0132 locus 67.36 () Automated name-based View Maps
Bmac0175c locus 63.17 Barley - Barley, LxHs - Hordeum-LxHs-2H Bmac0175c locus 50 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 Bmac0175c locus 67.27 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H Bmac0175c locus 67.27 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmac0175c locus 67.01 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H Bmac0175c locus 67.27 () Automated name-based View Maps
HVM23 locus 63.22 Barley - Barley, BinMap 2005 - Hordeum-Bins-2H HVM023 locus 71.5 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H HVM23 locus 67.21 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H HVM23 locus 67.21 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 HVM23 locus 67.21 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H HVM23 locus 67.2 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-2H HVM23 locus 67.64 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H HVM23 locus 50 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-2H HVM23 locus 36.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H HVM23 locus 67.01 () Automated name-based View Maps
Bmag0015 locus 63.28 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmag0015 locus 67.01 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H Bmag0015 locus 50 () Automated name-based View Maps
Bmac0144g locus 65.54 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmac0144g locus 63.65 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H Bmac0144g locus 52 () Automated name-based View Maps
Bmag0003c locus 73.68 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmag0003c locus 86.39 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-6H Bmag0003 locus 50.5 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H Bmag0003c locus 58 () Automated name-based View Maps
Bmac0144b locus 89.88 Barley - Barley, LxHs - Hordeum-LxHs-2H Bmac0144b locus 72 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmac0144b locus 99.81 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H Bmac0144b locus 99.81 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H Bmac0144b locus 95.7 () Automated name-based View Maps
p61m48A1 locus 96.63 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 p61m48A1 locus 104.02 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H p61m48A1 locus 81 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H p61m48A1 locus 104.02 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H p61m48A1 locus 104.02 () Automated name-based View Maps
HVM54 locus 69.23 Barley - Barley, Lx41 - Hordeum-Lx41-2H HVM54 locus 267.4 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H HVM54 locus 122.41 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 HVM54 locus 128.03 () Automated name-based View Maps
Barley - Barley, AxHs/QTL - Hordeum-Pillen-2H HVM54 locus 103 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-2H HVM54 locus 172.6 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H HVM54 locus 103 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H HVM54 locus 122.41 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-2H HVM54 locus 148.62 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H HVM54 locus 128.03 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H HVM54 locus 129.2 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-2H HVM0054 locus 135 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-2H HVM54 locus 129.2 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-2H HVM54 locus 136.7 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H HVM54 locus 128.03 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H HVM54 locus 118.6 () Automated name-based View Maps
e41m32B locus 57.55 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H e41m32B locus 139.88 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H e41m32B locus 139.88 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 e41m32B locus 139.88 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-2H e41m32B locus 114 () Automated name-based View Maps
e46m42B8 locus 51.67 Barley - Barley, LxHs - Hordeum-LxHs-2H e46m42B8 locus 121 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 e46m42B8 locus 145.79 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H e46m42B8 locus 145.79 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H e46m42B8 locus 145.79 () Automated name-based View Maps
p61homf locus 19.35 Barley - Barley, LxHs - Hordeum-LxHs-2H p61homf locus 151 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 p61homf locus 178.1 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H p61homf locus 178.1 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H p61homf locus 178.1 () Automated name-based View Maps
Hot1 locus 75.16 Barley - Barley, BinMap 2005 - Hordeum-Bins-2H Hot1 locus 66 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H Hot1 locus 61.05 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H Hot1 locus 71.67 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H Hot1 locus 63.4 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H Hot1 locus 61.05 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H Hot1 locus 64.98 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H Hot1 locus 68.71 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-2H Hot1 locus 60.9 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-2H Hot1 locus 60.6 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 Hot1 locus 61.05 () Automated name-based View Maps
scsnp06130 locus 87.43 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 scsnp06130 locus 93.81 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H scsnp06130 locus 94.2 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H scsnp06130 locus 93.81 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H scsnp06130 locus 93.81 () Automated name-based View Maps
scsnp01216 locus 19.03 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H scsnp01216 locus 29.04 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H scsnp01216 locus 29.04 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H scsnp01216 locus 25.61 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 scsnp01216 locus 29.04 () Automated name-based View Maps
scsnp02622 locus 0 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H scsnp02622 locus 9.31 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 scsnp02622 locus 9.31 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H scsnp02622 locus 9.31 () Automated name-based View Maps
scind02403 locus 73.35 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H scind02403 locus 58.37 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H scind02403 locus 58.37 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 scind02403 locus 58.37 () Automated name-based View Maps
Bmac0557 locus 62.21 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 Bmac0557 locus 66.09 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H Bmac0557 locus 66.09 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-2H EBmac0557 locus 85.5 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H Bmac0557 locus 66.09 () Automated name-based View Maps
Bmac0558 locus 63.1 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H Bmac0558 locus 67.26 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 Bmac0558 locus 67.26 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H Bmac0558 locus 67.26 () Automated name-based View Maps
scsnp03057 locus 61.53 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 scsnp03057 locus 69.25 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H scsnp03057 locus 69.25 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H scsnp03057 locus 69.25 () Automated name-based View Maps
scsnp00953 locus 60.62 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H scsnp00953 locus 69.63 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 scsnp00953 locus 69.63 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H scsnp00953 locus 69.63 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-2H scsnp00953 locus 69.17 () Automated name-based View Maps
scsnp05995 locus 60.46 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H scsnp05995 locus 69.89 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 scsnp05995 locus 69.89 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H scsnp05995 locus 69.89 () Automated name-based View Maps
Bmac0521 locus 59.28 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H Bmac0521 locus 71.04 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 Bmac0521 locus 71.04 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H Bmac0521 locus 71.04 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H EBmac0521 locus 128.3 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.