*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, LxHs
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-LxHs-2H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, LxHs [ View Map Set Info ]
Map Name: Hordeum-LxHs-2H
Map Start: 0
Map Stop: 151
Features by Type:
58 locus
58 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 58.       Previous | of 3 | Next
Barley - Barley, LxHs - Hordeum-LxHs-2H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Bmag0518 locus 44 Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-2H Bmag0518 locus 29.6 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H Bmag0518 locus 67.92 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmag0518 locus 72.01 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H Bmag0518 locus 69.1 () Automated name-based View Maps
Bmag0115 locus 44 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmag0115 locus 75.05 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H Bmag0115 locus 68.32 () Automated name-based View Maps
Bmag0378 locus 44 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H Bmag0378 locus 70.9 () Automated name-based View Maps
Barley - Barley, AxHs/QTL - Hordeum-Pillen-2H Bmag0378 locus 45 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H Bmag0378 locus 68.79 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-2H Bmag0378.2H locus 74.4 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmag0378 locus 76.11 () Automated name-based View Maps
Bmag0571c locus 44 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmag0571c locus 85.64 () Automated name-based View Maps
EBmac0850 locus 47 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H EBmac0850 locus 78.49 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H EBmac0850 locus 65.91 () Automated name-based View Maps
EBmac0854 locus 47 Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H EBmac0854 locus 66.33 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H EBmac0854 locus 70.39 () Automated name-based View Maps
EBmac0715 locus 48 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H EBmac0715 locus 65.3 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H EBmac0715 locus 65.03 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H EBmac0715 locus 67.97 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-2H EBmac0715 locus 22 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H EBmac0715 locus 67.97 () Automated name-based View Maps
GMS003 locus 48 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H GMS003 locus 69.01 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H GMS003 locus 109.2 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 GMS003 locus 69.01 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H GMS003 locus 61.68 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H GMS003 locus 69.01 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H GMS003 locus 66.05 () Automated name-based View Maps
EBmac0640 locus 49 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H EBmac0640 locus 68.78 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H EBmac0640 locus 64.21 () Automated name-based View Maps
Bmac0129b locus 50 Barley - Barley, B73xCPI - Barley, B73xCPI-3H Bmac0129 locus 46.1 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmac0129b locus 67.01 () Automated name-based View Maps
HVM63 locus 50 Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H HVM63 locus 3.13 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 HVM63 locus 67.3 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H HVM63 locus 67.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H HVM63 locus 67.01 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H HVM63 locus 67.3 () Automated name-based View Maps
HVM26 locus 50 Barley - Barley, Lx41 - Hordeum-Lx41-2H HVM26 locus 101.5 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H HVM26 locus 67.01 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H HVM26 locus 3.13 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 HVM26 locus 67.25 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H HVM26 locus 67.25 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H HVM26 locus 67.25 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-2H HVM026 locus 73 () Automated name-based View Maps
EBmac0558 locus 50 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H EBmac0558 locus 69.72 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H EBmac0558 locus 66.9 () Automated name-based View Maps
EBmac0525 locus 50 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H EBmac0525 locus 70.98 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H EBmac0525 locus 70.98 () Automated name-based View Maps
Bmac0132 locus 50 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H Bmac0132 locus 67.36 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmac0132 locus 67.01 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 Bmac0132 locus 67.36 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H Bmac0132 locus 67.36 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H Bmac0132 locus 63.26 () Automated name-based View Maps
Bmac0175c locus 50 Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H Bmac0175c locus 63.17 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 Bmac0175c locus 67.27 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H Bmac0175c locus 67.27 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H Bmac0175c locus 67.27 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmac0175c locus 67.01 () Automated name-based View Maps
EBmac0557 locus 50 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H EBmac0557 locus 67.01 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-2H EBmac0557 locus 85.5 () Automated name-based View Maps
EBmac0849 locus 50 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H EBmac0849 locus 67.01 () Automated name-based View Maps
HVM23 locus 50 Barley - Barley, BinMap 2005 - Hordeum-Bins-2H HVM023 locus 71.5 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H HVM23 locus 67.21 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 HVM23 locus 67.21 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H HVM23 locus 67.21 () Automated name-based View Maps
Barley - Barley, Cali-sib x BowmanBC, QTL - Hordeum-CxB-2H HVM23 locus 36.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H HVM23 locus 67.01 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-2H HVM23 locus 67.2 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-2H HVM23 locus 67.64 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H HVM23 locus 63.22 () Automated name-based View Maps
Bmag0015 locus 50 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmag0015 locus 67.01 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H Bmag0015 locus 63.28 () Automated name-based View Maps
EBmac0521 locus 52 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H EBmac0521 locus 67.01 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H EBmac0521 locus 63 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-2H EBmac0521 locus 128.3 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-2H EBmac0521.2H locus 64.9 () Automated name-based View Maps
Bmac0144g locus 52 Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H Bmac0144g locus 65.54 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmac0144g locus 63.65 () Automated name-based View Maps
Bmac0192c locus 53 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmac0192 locus 73.17 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmac0192 locus 73.17 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmac0192c locus 81.7 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmac0192 locus 107.11 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmac0192 locus 73.17 () Automated name-based View Maps
HvXan locus 54 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H HvXan locus 62.69 () Automated name-based View Maps
Bmag0003c locus 58 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H Bmag0003c locus 86.39 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-2H Bmag0003c locus 73.68 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.