*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, LxHs
(Reference Set)
Barley-Barley, Abiotic QTL Consensus
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-LxHs-7H Hordeum-QTLConsensus-Abiotic-7H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, LxHs [ View Map Set Info ]
Map Name: Hordeum-LxHs-7H
Map Start: 0.00
Map Stop: 182.00
Features by Type:
65 locus
65 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 65.       Previous | of 3 | Next
Barley - Barley, LxHs - Hordeum-LxHs-7H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
EBmac0713 locus 0.00 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H EBmac0713 locus 12.35 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H EBmac0713 locus 12.35 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H EBmac0713 locus 5.50 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H EBmac0713 locus 19.20 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 EBmac0713 locus 5.50 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H EBmac0713 locus 5.50 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H EBmac0713 locus 0.00 () Automated name-based View Maps
HVPLASC1B locus 8.00 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H HVPLASC1B locus 6.80 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H HVPLASC1B locus 2.65 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-7H HVPLASC1B locus 0.00 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-7H HvPLASC1B locus 0.00 () Automated name-based View Maps
e43m38C6(114)(7H) locus 11.00 No other positions
Bmag0021 locus 13.00 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmag0021 locus 12.90 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmag0021 locus 9.14 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmag0021 locus 6.78 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmag0021 locus 12.90 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmag0021 locus 12.90 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H Bmag0021 locus 11.20 () Automated name-based View Maps
HVM4 locus 27.00 Barley - Barley, AxHs/QTL - Hordeum-Pillen-7H HVM4 locus 27.00 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-7H HVM4 locus 45.70 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-7H HVM0004 locus 19.20 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-7H HVM4 locus 27.50 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-7H HVM4 locus 18.00 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H HVM4 locus 27.28 () Automated name-based View Maps
HvWaxy4a locus 27.00 Barley - Barley consensus 2003 - Barley-consensus-2003-7H HvWaxy4a locus 24.30 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H HvWaxy4a locus 25.50 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H HvWaxy4a locus 23.21 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H HvWaxy4a locus 23.21 () Automated name-based View Maps
barep20k locus 36.00 No other positions
f1p34n locus 43.00 No other positions
AF022725A locus 59.00 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 AF022725A locus 47.48 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H AF022725A locus 47.48 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H AF022725A locus 59.90 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H AF022725A locus 45.80 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H AF022725A locus 47.48 () Automated name-based View Maps
barep22k locus 66.00 No other positions
Bmac0282b locus 78.00 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmac0282b locus 95.91 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmac0282b locus 95.91 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmac0282b locus 95.91 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmac0282b locus 85.02 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmac0282b locus 59.31 () Automated name-based View Maps
HVCMA locus 85.00 Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-7H HVCMA locus 71.28 () Automated name-based View Maps
Barley - Barley, AxHs/QTL - Hordeum-Pillen-7H HVCMA locus 86.00 () Automated name-based View Maps
Barley - Barley, HN x H602, Sato2009 - Hv-HNxH602-7H HVCMA locus 118.10 () Automated name-based View Maps
Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-7H HVCMA-7H locus 89.67 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H HVCMA locus 67.59 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H HVCMA locus 87.57 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H HVCMA locus 87.57 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H HVCMA locus 91.26 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-7H HVCMA locus 56.09 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-7H HVCMA locus 44.30 () Automated name-based View Maps
Barley - Barley, Lx41 - Hordeum-Lx41-7H HVCMA locus 39.30 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 HVCMA locus 87.57 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-7H HVCMA locus 74.00 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H HVCMA locus 68.50 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H HVCMA locus 67.59 () Automated name-based View Maps
Bmac0192a locus 89.00 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmac0192a locus 82.26 () Automated name-based View Maps
Bmac0047c locus 90.00 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmac0047c locus 73.78 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H Bmac0047c locus 79.50 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmac0047c locus 102.93 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmac0047c locus 73.78 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmac0047c locus 73.78 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmac0047c locus 81.78 () Automated name-based View Maps
Bmag0121a locus 92.00 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmag0121a locus 76.03 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmag0121a locus 76.03 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmag0121a locus 103.35 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmag0121a locus 76.03 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmag0121a locus 81.78 () Automated name-based View Maps
Bmac0579 locus 92.00 Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmac0579 locus 105.49 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmac0579 locus 80.32 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmac0579 locus 75.58 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmac0579 locus 75.58 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmac0579 locus 75.58 () Automated name-based View Maps
Bmac0162 locus 92.00 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmac0162 locus 75.52 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmac0162 locus 104.89 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmac0162 locus 80.32 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmac0162 locus 75.52 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmac0162 locus 75.52 () Automated name-based View Maps
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-7H Bmac0162 locus 60.80 () Automated name-based View Maps
Bmac0582 locus 92.00 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmac0582 locus 74.41 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmac0582 locus 74.41 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmac0582 locus 102.28 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmac0582 locus 74.41 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmac0582 locus 82.56 () Automated name-based View Maps
Bmac0297a locus 93.00 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmac0297a locus 76.48 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmac0297a locus 81.78 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmac0297a locus 76.48 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmac0297a locus 103.90 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmac0297a locus 76.48 () Automated name-based View Maps
Bmag0010a locus 93.00 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmag0010a locus 76.53 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmag0010a locus 103.95 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmag0010a locus 76.53 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmag0010a locus 81.77 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmag0010a locus 76.53 () Automated name-based View Maps
Bmag0228b locus 93.00 Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmag0228b locus 104.02 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmag0228b locus 76.50 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmag0228b locus 76.50 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmag0228b locus 76.50 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmag0228b locus 81.78 () Automated name-based View Maps
EBmac0785 locus 95.00 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 EBmac0785 locus 78.51 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H EBmac0785 locus 78.51 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H EBmac0785 locus 78.51 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H EBmac0785 locus 101.66 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H EBmac0785 locus 80.57 () Automated name-based View Maps
Bmag0109 locus 99.00 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmag0109 locus 82.67 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmag0109 locus 97.31 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmag0109 locus 79.06 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmag0109 locus 82.67 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmag0109 locus 82.67 () Automated name-based View Maps
Bmag0183 locus 100.00 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmag0183 locus 78.88 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmag0183 locus 84.92 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmag0183 locus 84.92 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmag0183 locus 95.50 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmag0183 locus 84.92 () Automated name-based View Maps
Bmag0189 locus 100.00 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Bmag0189 locus 84.27 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Bmag0189 locus 84.27 () Automated name-based View Maps
Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-7H Bmag0189 locus 96.09 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Bmag0189 locus 84.27 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Bmag0189 locus 79.06 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.