*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, LxV
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-LxV-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, LxV [ View Map Set Info ]
Map Name: Hordeum-LxV-3H
Map Start: 0
Map Stop: 164.2
Features by Type:
77 locus
77 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 77.       of 4 | Next
Barley - Barley, LxV - Hordeum-LxV-3H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
E45M55-572 locus 0 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E45M55-572 locus 0 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E45M55-572 locus 1.18 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E45M55-572 locus 13.5 () Automated name-based View Maps
E33M61-714 locus 3.1 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E33M61-714 locus 15.5 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E33M61-714 locus 3.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E33M61-714 locus 3.49 () Automated name-based View Maps
E41M32-149 locus 4.6 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E41M32-149 locus 16.4 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E41M32-149 locus 5.06 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E41M32-149 locus 4.48 () Automated name-based View Maps
E35M48-250 locus 13.9 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E35M48-250 locus 10.67 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-3H E35M48-250 locus 10.16 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E35M48-250 locus 22.7 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E35M48-250 locus 15.06 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H E35M48-250 locus 10.67 () Automated name-based View Maps
E37M33-583 locus 16.9 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E37M33-583 locus 24 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E37M33-583 locus 17.79 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E37M33-583 locus 12 () Automated name-based View Maps
E33M54-244 locus 21 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E33M54-244 locus 13.65 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E33M54-244 locus 22.49 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E33M54-244 locus 25.7 () Automated name-based View Maps
E33M54-245 locus 21 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E33M54-245 locus 22.49 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-3H E33M54-245 locus 12.52 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E33M54-245 locus 25.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E33M54-245 locus 13.65 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-3H E33M54-245 locus 13.18 () Automated name-based View Maps
E41M40-411 locus 21 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E41M40-411 locus 13.65 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E41M40-411 locus 25.7 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E41M40-411 locus 22.45 () Automated name-based View Maps
E42M32-116 locus 21 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E42M32-116 locus 13.65 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E42M32-116 locus 22.67 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E42M32-116 locus 25.7 () Automated name-based View Maps
E45M55-167 locus 25.2 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E45M55-167 locus 28.51 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E45M55-167 locus 18.42 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-3H E45M55-167 locus 17.29 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E45M55-167 locus 30.5 () Automated name-based View Maps
E41M40-358 locus 31 Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-3H E41M40-358 locus 22.63 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E41M40-358 locus 37.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E41M40-358 locus 25.42 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E41M40-358 locus 35.23 () Automated name-based View Maps
E37M38-213 locus 36.1 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E37M38-213 locus 40.68 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E37M38-213 locus 30.97 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E37M38-213 locus 42.5 () Automated name-based View Maps
E38M54-315 locus 36.1 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E38M54-315 locus 40.48 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E38M54-315 locus 42.4 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E38M54-315 locus 30.97 () Automated name-based View Maps
E35M54-188 locus 41.1 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E35M54-188 locus 45.84 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E35M54-188 locus 37.33 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E35M54-188 locus 49.5 () Automated name-based View Maps
E38M55-320 locus 44.3 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E38M55-320 locus 52.5 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-3H E38M55-320 locus 40.14 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-3H E38M55-320 locus 36.75 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E38M55-320 locus 40.14 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E38M55-320 locus 49.03 () Automated name-based View Maps
E37M32-471 locus 47.2 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E37M32-471 locus 60.42 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E37M32-471 locus 53.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E37M32-471 locus 41.96 () Automated name-based View Maps
E45M55-274 locus 52 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E45M55-274 locus 61.6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E45M55-274 locus 46 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E45M55-274 locus 59.83 () Automated name-based View Maps
E32M61-465 locus 53.4 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E32M61-465 locus 62.9 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E32M61-465 locus 57.51 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-3H E32M61-465 locus 50.48 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-3H E32M61-465 locus 48.44 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E32M61-465 locus 51.67 () Automated name-based View Maps
E33M61-131 locus 53.4 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E33M61-131 locus 63.8 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E33M61-131 locus 51.3 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E33M61-131 locus 57.51 () Automated name-based View Maps
E33M61-327 locus 53.4 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E33M61-327 locus 57.51 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E33M61-327 locus 52.19 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E33M61-327 locus 63.7 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-3H E33M61-327 locus 49.43 () Automated name-based View Maps
E35M48-226 locus 53.4 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E35M48-226 locus 57.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E35M48-226 locus 52.06 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E35M48-226 locus 63.8 () Automated name-based View Maps
E35M54-309 locus 53.4 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E35M54-309 locus 57.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E35M54-309 locus 52.06 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E35M54-309 locus 63.8 () Automated name-based View Maps
E35M54-310 locus 53.4 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E35M54-310 locus 52.06 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E35M54-310 locus 63.8 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E35M54-310 locus 57.5 () Automated name-based View Maps
E35M55-398 locus 53.4 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E35M55-398 locus 55.77 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-3H E35M55-398 locus 47.95 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-3H E35M55-398 locus 49.38 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E35M55-398 locus 51.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E35M55-398 locus 63.4 () Automated name-based View Maps
E37M38-174 locus 53.4 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-3H E37M38-174 locus 57.52 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-3H E37M38-174 locus 51.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E37M38-174 locus 63.8 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.