*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, LxV
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-LxV-5H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, LxV [ View Map Set Info ]
Map Name: Hordeum-LxV-5H
Map Start: 0
Map Stop: 160.7
Features by Type:
75 locus
75 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 75.       of 3 | Next
Barley - Barley, LxV - Hordeum-LxV-5H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
E38M55-114 locus 0 Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E38M55-114 locus 1.4 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E38M55-114 locus 8.7 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-5H E38M55-114 locus 0 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E38M55-114 locus 2.21 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E38M55-114 locus 5.55 () Automated name-based View Maps
E38M54-247 locus 7.3 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E38M54-247 locus 12.54 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E38M54-247 locus 10.81 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H E38M54-247 locus 12.54 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E38M54-247 locus 6.78 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E38M54-247 locus 15.6 () Automated name-based View Maps
E45M55-302 locus 20.7 No other positions
E33M61-370 locus 21.7 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E33M61-370 locus 27.78 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E33M61-370 locus 18.3 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-5H E33M61-370 locus 22.49 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E33M61-370 locus 30 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E33M61-370 locus 24.89 () Automated name-based View Maps
E33M54-218 locus 22.3 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E33M54-218 locus 25.78 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E33M54-218 locus 25.57 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E33M54-218 locus 28 () Automated name-based View Maps
E45M55-400 locus 22.3 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H E45M55-400 locus 25.57 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E45M55-400 locus 27.9 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E45M55-400 locus 19.97 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E45M55-400 locus 25.57 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E45M55-400 locus 25.7 () Automated name-based View Maps
E45M55-402 locus 22.3 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E45M55-402 locus 28.1 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E45M55-402 locus 25.79 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E45M55-402 locus 20.25 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E45M55-402 locus 25.7 () Automated name-based View Maps
E33M55-126 locus 22.8 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E33M55-126 locus 27.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E33M55-126 locus 25.94 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E33M55-126 locus 26.24 () Automated name-based View Maps
E35M61-222 locus 22.8 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E35M61-222 locus 24.67 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E35M61-222 locus 27.08 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E35M61-222 locus 31 () Automated name-based View Maps
E40M40-354 locus 32 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E40M40-354 locus 36.76 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E40M40-354 locus 40.6 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E40M40-354 locus 35.71 () Automated name-based View Maps
E40M40-358 locus 32 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E40M40-358 locus 40.6 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E40M40-358 locus 35.71 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E40M40-358 locus 36.76 () Automated name-based View Maps
E41M40-270 locus 33.3 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E41M40-270 locus 36.75 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E41M40-270 locus 40.26 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E41M40-270 locus 42.3 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-5H E41M40-270 locus 33.26 () Automated name-based View Maps
E45M55-304 locus 33.9 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E45M55-304 locus 46.9 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E45M55-304 locus 37.23 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E45M55-304 locus 39.91 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E45M55-304 locus 44.95 () Automated name-based View Maps
E32M61-282 locus 35 Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E32M61-282 locus 38.44 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E32M61-282 locus 44.82 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E32M61-282 locus 38.39 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E32M61-282 locus 46.8 () Automated name-based View Maps
E35M61-289 locus 35 Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-5H E35M61-289 locus 41.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E35M61-289 locus 44.34 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E35M61-289 locus 38.66 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-5H E35M61-289 locus 36.02 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E35M61-289 locus 46 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E35M61-289 locus 40.44 () Automated name-based View Maps
E35M48-513 locus 35.9 Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E35M48-513 locus 43.76 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E35M48-513 locus 39.66 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E35M48-513 locus 44.9 () Automated name-based View Maps
E35M61-264 locus 35.9 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E35M61-264 locus 39.7 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E35M61-264 locus 40.29 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E35M61-264 locus 45.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E35M61-264 locus 43.76 () Automated name-based View Maps
E42M51-519 locus 35.9 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E42M51-519 locus 39.68 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E42M51-519 locus 42.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E42M51-519 locus 44.8 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E42M51-519 locus 40.58 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-5H E42M51-519 locus 37.86 () Automated name-based View Maps
E37M32-177 locus 36.9 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E37M32-177 locus 47.3 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E37M32-177 locus 45.65 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E37M32-177 locus 41.02 () Automated name-based View Maps
E37M32-107 locus 37.6 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E37M32-107 locus 48.1 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E37M32-107 locus 45.65 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E37M32-107 locus 42.33 () Automated name-based View Maps
E39M61-360 locus 37.6 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E39M61-360 locus 41.64 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E39M61-360 locus 47.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E39M61-360 locus 45.76 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E39M61-360 locus 39.57 () Automated name-based View Maps
E42M51-192 locus 37.6 Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-5H E42M51-192 locus 44.36 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E42M51-192 locus 45.61 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E42M51-192 locus 41.62 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E42M51-192 locus 37.25 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E42M51-192 locus 47.5 () Automated name-based View Maps
E38M55-140 locus 39.3 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E38M55-140 locus 48.8 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E38M55-140 locus 44.09 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E38M55-140 locus 45.81 () Automated name-based View Maps
E41M32-416 locus 39.3 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E41M32-416 locus 49.2 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E41M32-416 locus 45.89 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E41M32-416 locus 43.54 () Automated name-based View Maps
E32M61-81 locus 41.6 Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H E32M61-81 locus 46.41 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-5H E32M61-81 locus 39.47 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-5H E32M61-81 locus 43.64 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H E32M61-81 locus 48.21 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E32M61-81 locus 50.2 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H E32M61-81 locus 48.21 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.