*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Nure x Tremois
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hv-Nure/Tremois-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Nure x Tremois [ View Map Set Info ]
Map Name: Hv-Nure/Tremois-3H
Map Start: 0
Map Stop: 185.5
Features by Type:
78 locus
78 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 78.       of 4 | Next
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-3H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Tel3S locus 0 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-3H Tel3S locus 1.61 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-3H Tel3S locus 5.05 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-3H Tel3S locus 0 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-3 Tel3S locus 1.61 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-3H Tel3S locus 1.61 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-3H Tel3S locus 1.72 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-3H Tel3S locus 0 () Automated name-based View Maps
E42M38-230 locus 6.9 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H E42M38-230 locus 18.6 () Automated name-based View Maps
bPb-1264 locus 8.2 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-1264 locus 6 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-1264 locus 17.6 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-3H bPb-1264 locus 0 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H bPb-1264 locus 8.82 () Automated name-based View Maps
bPb-9402 locus 16.5 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-9402 locus 23.6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-9402 locus 13.7 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-3H bPb-9402 locus 5.6 () Automated name-based View Maps
bPb-6127 locus 16.6 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-6127 locus 13.7 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-3H bPb-6127 locus 5.6 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-6127 locus 23.6 () Automated name-based View Maps
bPb-7199 locus 16.7 Barley - Barley, B73xCPI - Barley, B73xCPI-3H bPb-7199 locus 5.6 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-7199 locus 23.6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-7199 locus 13.7 () Automated name-based View Maps
bPb-6978 locus 20.2 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-6978 locus 25.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-6978 locus 20 () Automated name-based View Maps
bPb-0654 locus 20.6 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-0654 locus 26.2 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H bPb-0654 locus 20.85 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-0654 locus 20 () Automated name-based View Maps
bPb-7448 locus 20.9 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-7448 locus 20 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-7448 locus 26.5 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H bPb-7448 locus 20.85 () Automated name-based View Maps
TC-MYB1 locus 27.6 No other positions
bPb-9878 locus 37.5 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-9878 locus 44.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-9878 locus 48.3 () Automated name-based View Maps
bPb-6944 locus 37.5 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-6944 locus 48.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-6944 locus 44.7 () Automated name-based View Maps
bPb-0527 locus 37.5 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-0527 locus 44.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-0527 locus 48.3 () Automated name-based View Maps
bPb-1814 locus 37.6 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-1814 locus 48.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-1814 locus 44.7 () Automated name-based View Maps
bPb-5487 locus 37.6 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-5487 locus 44.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-5487 locus 48.3 () Automated name-based View Maps
bPb-6825 locus 37.6 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-6825 locus 44.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-6825 locus 48.3 () Automated name-based View Maps
bPb-2548 locus 37.6 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-2548 locus 48.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-2548 locus 44.7 () Automated name-based View Maps
bPb-2965 locus 37.6 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-2965 locus 48.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-2965 locus 44.7 () Automated name-based View Maps
bPb-0312 locus 40.3 Barley - Barley, B73xCPI - Barley, B73xCPI-3H bPb-0312 locus 32.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-0312 locus 47.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-0312 locus 41.8 () Automated name-based View Maps
bPb-9129 locus 42.6 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-9129 locus 49.9 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H bPb-9129 locus 38.46 () Automated name-based View Maps
bPb-5892 locus 42.9 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-5892 locus 51.6 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-5892 locus 49.9 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H bPb-5892 locus 38.46 () Automated name-based View Maps
bPb-2910 locus 43 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-2910 locus 49.9 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H bPb-2910 locus 38.46 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-2910 locus 51.6 () Automated name-based View Maps
bPb-7938 locus 43 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H bPb-7938 locus 38.46 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-7938 locus 49.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-7938 locus 51.4 () Automated name-based View Maps
bPb-2993 locus 43.1 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-2993 locus 51.6 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H bPb-2993 locus 38.46 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-2993 locus 49.9 () Automated name-based View Maps
bPb-2324 locus 43.1 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-3H bPb-2324 locus 49.9 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H bPb-2324 locus 38.46 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-3H bPb-2324 locus 51.6 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.