*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Nure x Tremois
(Reference Set)
Barley-Barley, B73xCPI
Min.
Correspondences
Align Vertically
Stack
Maps Hv-Nure/Tremois-5H Barley, B73xCPI-5H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Nure x Tremois [ View Map Set Info ]
Map Name: Hv-Nure/Tremois-5H
Map Start: 0.00
Map Stop: 203.30
Features by Type:
113 locus
113 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 113.       of 5 | Next
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-5H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
bPb-2330 locus 0.00 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-2330 locus 1.70 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-2330 locus 0.00 () Automated name-based View Maps
bPb-5317 locus 0.50 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-5317 locus 0.00 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-5317 locus 0.90 () Automated name-based View Maps
scssr02306 locus 7.60 Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H scssr02306 locus 6.13 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-5H scssr02306 locus 0.00 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H scssr02306 locus 7.50 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-5 scssr02306 locus 0.00 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-5H scssr02306 locus 0.00 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-5H scssr02306 locus 54.28 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H scssr02306 locus 14.51 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-5H scssr02306 locus 7.30 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-5H scssr02306 locus 0.00 () Automated name-based View Maps
Los2 locus 13.00 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H Los2 locus 12.00 () Automated name-based View Maps
bPb-4814 locus 16.30 Barley - Barley, B73xCPI - Barley, B73xCPI-5H bPb-4814 locus 21.00 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-4814 locus 15.40 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-4814 locus 14.80 () Automated name-based View Maps
bPb-1084b locus 16.40 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-1084b locus 14.90 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-1084b locus 15.40 () Automated name-based View Maps
bPb-2460 locus 16.40 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-2460 locus 18.70 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-2460 locus 17.60 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H bPb-2460 locus 34.89 () Automated name-based View Maps
bPb-8072 locus 16.40 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-8072 locus 18.70 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-8072 locus 16.20 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H bPb-8072 locus 34.89 () Automated name-based View Maps
bPb-7676b locus 16.50 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-7676b locus 14.90 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-7676b locus 15.40 () Automated name-based View Maps
bPb-2591 locus 16.50 Barley - Barley, B73xCPI - Barley, B73xCPI-5H bPb-2591 locus 21.00 () Automated name-based View Maps
bPb-7407 locus 17.30 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-7407 locus 16.90 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H bPb-7407 locus 34.89 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-7407 locus 18.30 () Automated name-based View Maps
bPb-0091 locus 17.90 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-0091 locus 19.00 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H bPb-0091 locus 34.89 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-0091 locus 21.50 () Automated name-based View Maps
bPb-0351 locus 17.90 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-0351 locus 19.00 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-0351 locus 21.50 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H bPb-0351 locus 34.89 () Automated name-based View Maps
bPb-1807 locus 18.20 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-1807 locus 21.50 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-1807 locus 19.00 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H bPb-1807 locus 34.89 () Automated name-based View Maps
bPb-6568 locus 18.30 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-6568 locus 21.50 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-6568 locus 19.20 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H bPb-6568 locus 34.89 () Automated name-based View Maps
bPb-6183 locus 26.70 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-6183 locus 26.10 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-6183 locus 27.80 () Automated name-based View Maps
E37M38-261 locus 26.80 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H E37M38-261 locus 27.00 () Automated name-based View Maps
bPb-1820 locus 26.90 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-1820 locus 28.40 () Automated name-based View Maps
bPb-5166 locus 26.90 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-5166 locus 28.40 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-5166 locus 34.00 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H bPb-5166 locus 39.26 () Automated name-based View Maps
bPb-2266 locus 26.90 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-2266 locus 34.00 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-2266 locus 28.40 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H bPb-2266 locus 39.26 () Automated name-based View Maps
bPb-8256 locus 27.70 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-8256 locus 29.10 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-8256 locus 34.70 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-5H bPb-8256 locus 34.70 () Automated name-based View Maps
bPb-9327 locus 27.80 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-9327 locus 34.70 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-9327 locus 29.10 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-5H bPb-9327 locus 34.70 () Automated name-based View Maps
bPb-9632 locus 28.70 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-9632 locus 29.90 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-9632 locus 31.00 () Automated name-based View Maps
bPb-6067 locus 28.70 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-6067 locus 29.90 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-6067 locus 31.00 () Automated name-based View Maps
bPb-6495 locus 28.70 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H bPb-6495 locus 31.00 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H bPb-6495 locus 29.80 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.