*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Nure x Tremois
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hv-Nure/Tremois-6H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Nure x Tremois [ View Map Set Info ]
Map Name: Hv-Nure/Tremois-6H
Map Start: 0
Map Stop: 140.4
Features by Type:
81 locus
81 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 81.       of 4 | Next
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-6H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
Bmac0316 locus 0 Barley - Barley, Lina x H.spont, SNP - Hordeum-LiHs-SNP-6H Bmac0316 locus 94.2 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-6H Bmac0316 locus 9.52 () Automated name-based View Maps
Barley - Barley, Cebada Capa x SusPtrit - Hv-CebadaCapa/SusPtrit-6H Bmac0316 locus 0 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-6H Bmac0316 locus 8.2 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-6H Bmac0316 locus 6.23 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-6H Bmac0316 locus 7.16 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-6H Bmac0316 locus 0 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-6H Bmac0316 locus 7.16 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-6H Bmac0316 locus 4.04 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-6H Bmac0316 locus 9.52 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-6H Bmac0316 locus 4.2 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-6H Bmac0316 locus 1.53 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-6 Bmac0316 locus 9.52 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H Bmac0316 locus 2.2 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-6H Bmac0316 locus 4.2 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H Bmac0316 locus 4.6 () Automated name-based View Maps
Barley - Barley, LxHs - Hordeum-LxHs-6H Bmac0316 locus 6 () Automated name-based View Maps
bPb-9065 locus 3.1 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-9065 locus 9.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-9065 locus 8.2 () Automated name-based View Maps
bPb-8135 locus 3.3 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-8135 locus 9.1 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-8135 locus 8.2 () Automated name-based View Maps
bPb-1009 locus 7.5 Barley - Barley, B73xCPI - Barley, B73xCPI-6H bPb-1009 locus 13.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-1009 locus 13.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-1009 locus 12 () Automated name-based View Maps
bPb-3554 locus 18.1 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-3554 locus 19.4 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-3554 locus 21.7 () Automated name-based View Maps
bPb-2672 locus 18.1 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-2672 locus 21.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-2672 locus 20.5 () Automated name-based View Maps
bPb-6069 locus 18.2 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-6069 locus 21.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-6069 locus 26.5 () Automated name-based View Maps
bPb-0742 locus 19.2 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-0742 locus 24.9 () Automated name-based View Maps
bPb-9651 locus 19.2 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-9651 locus 24.9 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-6H bPb-9651 locus 23.8 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-9651 locus 28.8 () Automated name-based View Maps
bPb-8836 locus 19.2 Barley - Barley, B73xCPI - Barley, B73xCPI-6H bPb-8836 locus 23.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-8836 locus 24.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-8836 locus 28.8 () Automated name-based View Maps
E39M61-505 locus 20.6 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H E39M61-505 locus 23.7 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-6H E39M61-505 locus 28.23 () Automated name-based View Maps
Barley - Barley, LxV - Hordeum-LxV-6H E39M61-505 locus 22 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-6H E39M61-505 locus 23.88 () Automated name-based View Maps
bPb-6457 locus 27.7 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-6457 locus 31.8 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-6H bPb-6457 locus 32.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-6457 locus 38 () Automated name-based View Maps
bPb-2058 locus 27.7 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-2058 locus 38 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-6H bPb-2058 locus 32.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-2058 locus 31.8 () Automated name-based View Maps
bPb-3427 locus 27.7 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-3427 locus 38 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-6H bPb-3427 locus 32.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-3427 locus 31.8 () Automated name-based View Maps
bPb-0245 locus 30.4 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-0245 locus 40.1 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-0245 locus 35.7 () Automated name-based View Maps
bPb-7998 locus 30.4 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-7998 locus 35.8 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-7998 locus 38.2 () Automated name-based View Maps
E37M38-401 locus 32.8 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H E37M38-401 locus 40.7 () Automated name-based View Maps
mwg634b locus 33.8 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H MWG634B locus 39.6 () Automated name-based View Maps
bPb-0597 locus 35.4 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-0597 locus 41.7 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-0597 locus 48.77 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-0597 locus 50.1 () Automated name-based View Maps
bPb-6002 locus 35.4 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-6002 locus 41.7 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-6002 locus 48.77 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-6002 locus 50.1 () Automated name-based View Maps
bPb-3927 locus 35.5 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-3927 locus 50.1 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-3927 locus 41.7 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-3927 locus 48.77 () Automated name-based View Maps
bPb-0396 locus 42.1 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-0396 locus 56.5 () Automated name-based View Maps
bPb-2464 locus 45.4 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-2464 locus 57.4 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-2464 locus 63.8 () Automated name-based View Maps
bPb-5822 locus 45.4 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-5822 locus 64.8 () Automated name-based View Maps
Barley - Barley, B73xCPI - Barley, B73xCPI-6H bPb-5822 locus 47.8 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-5822 locus 57.4 () Automated name-based View Maps
bPb-2592 locus 46.1 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-6H bPb-2592 locus 64.8 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H bPb-2592 locus 61.96 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H bPb-2592 locus 58.4 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.