*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OPA 2009, Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OPA-2009-4H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OPA 2009, Consensus [ View Map Set Info ]
Map Name: Hordeum-OPA-2009-4H
Map Start: 0
Map Stop: 191.61
Features by Type:
353 locus
353 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 353.       Previous | of 15 | Next
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-4H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
POPA1_0785 locus 93.87 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_0785 locus 102.93 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_0785 locus 93.08 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_0785 locus 93.87 () Automated name-based View Maps
POPA1_0793 locus 44.94 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_0793 locus 44.94 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_0793 locus 50.22 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_0793 locus 46.73 () Automated name-based View Maps
POPA1_0807 locus 55.63 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_0807 locus 63.79 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_0807 locus 55.63 () Automated name-based View Maps
POPA1_0829 locus 73.84 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_0829 locus 73.84 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_0829 locus 83.75 () Automated name-based View Maps
POPA1_0881 locus 54.25 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_0881 locus 54.44 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H POPA1_0881 locus 53.5 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_0881 locus 60.49 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_0881 locus 54.25 () Automated name-based View Maps
POPA1_0942 locus 48.5 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_0942 locus 52.27 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_0942 locus 55.15 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_0942 locus 48.5 () Automated name-based View Maps
POPA1_0946 locus 52.75 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_0946 locus 52.27 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H POPA1_0946 locus 52.5 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_0946 locus 59.06 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_0946 locus 52.75 () Automated name-based View Maps
POPA1_1004 locus 77.31 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1004 locus 77.31 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1004 locus 86.66 () Automated name-based View Maps
POPA1_1019 locus 123.29 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1019 locus 146.48 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1019 locus 123.29 () Automated name-based View Maps
POPA1_1042 locus 51.3 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1042 locus 51.3 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_1042 locus 52.27 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1042 locus 56.22 () Automated name-based View Maps
POPA1_1066 locus 113.92 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1066 locus 134.55 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1066 locus 113.92 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_1066 locus 110.69 () Automated name-based View Maps
POPA1_1070 locus 65.8 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1070 locus 65.8 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_1070 locus 64.4 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1070 locus 77 () Automated name-based View Maps
POPA1_1114 locus 54.25 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1114 locus 54.25 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1114 locus 59.8 () Automated name-based View Maps
POPA1_1136 locus 23.1 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_1136 locus 29.2 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1136 locus 24.71 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1136 locus 23.1 () Automated name-based View Maps
POPA1_1180 locus 40.96 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1180 locus 40.96 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1180 locus 48.77 () Automated name-based View Maps
POPA1_1186 locus 121.83 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1186 locus 121.83 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1186 locus 144.4 () Automated name-based View Maps
Barley - Barley, SFNB QTL 2017 - Barley, SFNB QTL 2017 4H POPA1_1186 locus 121.83 () Automated name-based View Maps
POPA1_1199 locus 22.36 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1199 locus 23.96 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1199 locus 22.36 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_1199 locus 28.11 () Automated name-based View Maps
POPA1_1207 locus 62.83 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_1207 locus 61.14 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H POPA1_1207 locus 57.3 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1207 locus 62.83 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1207 locus 72.36 () Automated name-based View Maps
POPA1_1213 locus 86.27 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1213 locus 95.22 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_1213 locus 83.15 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1213 locus 86.27 () Automated name-based View Maps
POPA1_1224 locus 65.05 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1224 locus 65.05 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1224 locus 78.5 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H POPA1_1224 locus 61.5 () Automated name-based View Maps
POPA1_1229 locus 65.05 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1229 locus 78.08 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1229 locus 65.05 () Automated name-based View Maps
POPA1_1244 locus 54.98 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1244 locus 54.98 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1244 locus 61.56 () Automated name-based View Maps
POPA1_1292 locus 96.59 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1292 locus 109.65 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1292 locus 96.59 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_1292 locus 96.36 () Automated name-based View Maps
POPA1_1299 locus 111.68 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 4H POPA1_1299 locus 110.7 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1299 locus 119.62 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1299 locus 111.68 () Automated name-based View Maps
POPA1_1319 locus 76.03 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-4H POPA1_1319 locus 86.01 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-4H POPA1_1319 locus 76.03 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H POPA1_1319 locus 75.44 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.