*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OPA 2009, Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OPA-2009-6H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OPA 2009, Consensus [ View Map Set Info ]
Map Name: Hordeum-OPA-2009-6H
Map Start: 0
Map Stop: 199.22
Features by Type:
367 locus
367 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 367.       Previous | of 15 | Next
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-6H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
POPA1_0331 locus 81.22 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0331 locus 92.69 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0331 locus 81.22 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0331 locus 101.86 () Automated name-based View Maps
POPA1_0355 locus 44.77 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0355 locus 60.87 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0355 locus 44.77 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0355 locus 48.8 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0355 locus 49.17 () Automated name-based View Maps
POPA1_0377 locus 55.94 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0377 locus 60.65 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0377 locus 55.94 () Automated name-based View Maps
POPA1_0390 locus 128.48 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0390 locus 128.48 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0390 locus 157.56 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0390 locus 137.41 () Automated name-based View Maps
POPA1_0400 locus 88.9 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0400 locus 100.68 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0400 locus 111.81 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0400 locus 88.9 () Automated name-based View Maps
POPA1_0427 locus 34.4 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0427 locus 48.77 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0427 locus 37.99 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0427 locus 34.4 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0427 locus 37.4 () Automated name-based View Maps
POPA1_0455 locus 64.36 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0455 locus 73.84 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0455 locus 64.36 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0455 locus 65.6 () Automated name-based View Maps
POPA1_0461 locus 48.74 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0461 locus 48.74 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0461 locus 60.87 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0461 locus 49.8 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0461 locus 52.19 () Automated name-based View Maps
POPA1_0462 locus 44.77 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0462 locus 44.77 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0462 locus 48.8 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0462 locus 49.17 () Automated name-based View Maps
POPA1_0469 locus 72.54 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0469 locus 81.79 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0469 locus 72.54 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0469 locus 69.3 () Automated name-based View Maps
POPA1_0494 locus 42.36 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0494 locus 44.96 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0494 locus 42.36 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0494 locus 44.1 () Automated name-based View Maps
POPA1_0513 locus 55.94 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0513 locus 55.94 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0513 locus 60.65 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0513 locus 68.51 () Automated name-based View Maps
POPA1_0539 locus 46.11 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0539 locus 50.33 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0539 locus 60.87 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0539 locus 49.1 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0539 locus 46.11 () Automated name-based View Maps
POPA1_0595 locus 94.73 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0595 locus 94.73 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0595 locus 107.49 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0595 locus 92.3 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0595 locus 118.41 () Automated name-based View Maps
POPA1_0608 locus 80.52 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0608 locus 80.52 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0608 locus 88.25 () Automated name-based View Maps
POPA1_0635 locus 60.23 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0635 locus 65.83 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0635 locus 60.23 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0635 locus 60.9 () Automated name-based View Maps
POPA1_0645 locus 118.35 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0645 locus 149.93 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0645 locus 118.35 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0645 locus 113.2 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0645 locus 129.73 () Automated name-based View Maps
POPA1_0659 locus 55 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0659 locus 67.42 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0659 locus 55 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0659 locus 59.25 () Automated name-based View Maps
POPA1_0669 locus 2.27 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0669 locus 2.84 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0669 locus 2.27 () Automated name-based View Maps
POPA1_0676 locus 28.39 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0676 locus 28.39 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0676 locus 32.05 () Automated name-based View Maps
POPA1_0734 locus 96.73 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0734 locus 96.73 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0734 locus 109.05 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0734 locus 93.5 () Automated name-based View Maps
POPA1_0748 locus 123.84 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0748 locus 153.19 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0748 locus 123.84 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0748 locus 133.9 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0748 locus 116.1 () Automated name-based View Maps
POPA1_0749 locus 55.65 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0749 locus 59.25 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0749 locus 55.65 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0749 locus 67.42 () Automated name-based View Maps
Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0749 locus 55 () Automated name-based View Maps
POPA1_0781 locus 64.36 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0781 locus 72.17 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0781 locus 64.36 () Automated name-based View Maps
POPA1_0799 locus 31.73 Barley - Barley, 2012 9KSNP - Barley, 2012 9KSNP 6H POPA1_0799 locus 33.2 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-6H POPA1_0799 locus 35.32 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-6H POPA1_0799 locus 31.73 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H POPA1_0799 locus 47.69 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.