*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OWB
(Reference Set) 		Barley-Barley, Abiotic QTL Consensus
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OWB-2H Hordeum-QTLConsensus-Abiotic-2H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OWB [ View Map Set Info ]
Map Name: Hordeum-OWB-2H
Map Start: 0.00
Map Stop: 180.30
Features by Type:
30 locus
30 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 30 of 30.       Previous | of 2
Barley - Barley, OWB - Hordeum-OWB-2H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
X2.4 locus 161.10 Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H X2.4 locus 169.72 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H X2.4 locus 155.12 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H X2.4 locus 155.12 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 X2.4 locus 155.12 () Automated name-based View Maps
X2.5 locus 170.20 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H X2.5 locus 164.33 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H X2.5 locus 178.89 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 X2.5 locus 164.33 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H X2.5 locus 164.33 () Automated name-based View Maps
wst locus 172.70 Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H wst locus 166.31 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 wst locus 166.31 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H wst locus 180.86 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H wst locus 166.31 () Automated name-based View Maps
X2.6 locus 178.80 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H X2.6 locus 172.96 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 X2.6 locus 172.96 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H X2.6 locus 187.45 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H X2.6 locus 172.96 () Automated name-based View Maps
X2.1 locus 39.20 Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H X2.1 locus 46.79 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.