*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OWB, 2004
(Reference Set)
Barley-Barley consensus
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OWB-2004-7H Barley-Consensus-7H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
chromband
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OWB, 2004 [ View Map Set Info ]
Map Name: Hordeum-OWB-2004-7H
Map Start: 0.00
Map Stop: 187.90
Features by Type:
33 locus
33 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 33 of 33.       Previous | of 2
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-7H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
AW982580 locus 30.50 Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H AW982580 locus 29.10 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H AW982580 locus 30.30 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H AW982580 locus 22.97 () Automated name-based View Maps
BE602073 locus 46.90 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H BE602073 locus 44.40 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H BE602073 locus 44.20 () Automated name-based View Maps
ABC1024 locus 112.00 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H ABC1024 locus 94.40 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H ABC1024 locus 117.20 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H ABC1024 locus 112.44 () Automated name-based View Maps
DsT-30 locus 120.10 Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H DsT-30 locus 125.70 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H DsT-30 locus 121.16 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H DsT-30 locus 98.60 () Automated name-based View Maps
GBM1065 locus 165.50 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H GBM1065 locus 132.80 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H GBM1065 locus 177.50 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H GBM1065 locus 135.11 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-7H GBM1065-7H locus 128.60 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H GBM1065 locus 171.52 () Automated name-based View Maps
Tha1 locus 187.90 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H Tha1 locus 151.20 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H Tha1 locus 151.60 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Tha1 locus 153.50 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-7H Tha1 locus 139.58 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H Tha1 locus 197.59 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Tha1 locus 153.50 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-7H Tha1 locus 175.60 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H Tha1 locus 199.50 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Tha1 locus 151.60 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Tha1 locus 153.50 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-7H Tha1 locus 185.48 () Automated name-based View Maps
DsT-31 locus 33.10 No other positions
BF254110 locus 58.20 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.