*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OWB, 2005
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OWB-2005-2H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OWB, 2005 [ View Map Set Info ]
Map Name: Hordeum-OWB-2005-2H
Map Start: 0
Map Stop: 179.6
Features by Type:
35 locus
35 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 35 of 35.       Previous | of 2
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-2H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
scssr02236 locus 63 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H scssr02236 locus 62.38 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H scssr02236 locus 72.75 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 scssr02236 locus 62.38 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H scssr02236 locus 62.38 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H scssr02236 locus 63.6 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H scssr02236 locus 69.63 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H scssr02236 locus 72.3 () Automated name-based View Maps
BCD1434.2 locus 65.2 Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-2H BCD1434.2 locus 64 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H BCD1434.2 locus 68.3 () Automated name-based View Maps
scsnp03343 locus 83.4 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H scsnp03343 locus 78.6 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-2H scsnp03343 locus 74.77 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H scsnp03343 locus 91.12 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H scsnp03343 locus 80.8 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H scsnp03343 locus 93.58 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H scsnp03343 locus 80.8 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 scsnp03343 locus 80.8 () Automated name-based View Maps
DsT-41 locus 97.1 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H DsT-41 locus 88.5 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H DsT-41 locus 108.99 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-2H DsT-41 locus 100.6 () Automated name-based View Maps
KFP203 locus 104.3 Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-2H KFP203 locus 107.7 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 KFP203 locus 98.82 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H KFP203 locus 97.77 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-2H KFP203 locus 106.7 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H KFP203 locus 112.45 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H KFP203 locus 93.4 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H KFP203 locus 98.82 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H KFP203 locus 98.82 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H KFP203 locus 115.66 () Automated name-based View Maps
ABG1032 locus 116.8 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H ABG1032 locus 100.3 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-2H ABG1032 locus 119.9 () Automated name-based View Maps
Aglu-x locus 162.5 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H Aglu-x locus 142.8 () Automated name-based View Maps
GBM1012 locus 170.1 Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H GBM1012 locus 182.41 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-2H GBM1012-2H locus 156.9 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H GBM1012 locus 146.2 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-2H GBM1012 locus 172.4 () Automated name-based View Maps
Barley - Barley, Vada x SusPtrit - Hv-Vada/SusPtrit-2H GBM1012 locus 135.11 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H GBM1012 locus 149.81 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H GBM1012 locus 149.81 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-2H GBM1012 locus 186.77 () Automated name-based View Maps
scssr08447 locus 179.5 Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H scssr08447 locus 187.48 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 scssr08447 locus 172.99 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H scssr08447 locus 172.99 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H scssr08447 locus 172.99 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-2H scssr08447 locus 152.7 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H scssr08447 locus 190.09 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-2H scssr08447 locus 173.6 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-2H scssr08447 locus 156.49 () Automated name-based View Maps
MWG720 locus 164.5 Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-2H MWG720 locus 173.05 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-2H MWG720 locus 164.4 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-2H MWG720 locus 158.51 () Automated name-based View Maps
Wheat A - T. monococcum, DV92 x G3116 - Tm-Dubcovsky2-2A Xmwg720 locus 61.7 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-2H MWG720 locus 167.2 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-2H MWG720 locus 158.51 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-2H MWG720 locus 176.93 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-2 MWG720 locus 158.51 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-2H MWG720 locus 148.67 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.