*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OWB, OPA2008
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OWB-OPA2008-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OWB, OPA2008 [ View Map Set Info ]
Map Name: Hordeum-OWB-OPA2008-3H
Map Start: 0.00
Map Stop: 208.01
Features by Type:
372 locus
12 qtl
384 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 384.       of 16 | Next
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-3H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
QS/T.DiMo-3H qtl 166.12 No other positions
QGpc.StMo-3H.2 qtl 154.84 No other positions
QDp.StMo-3H qtl 154.84 No other positions
QBgnm.HaTR-3H.2 qtl 112.81 No other positions
QGpc.StMo-3H qtl 112.81 No other positions
QAa.StMo-3H qtl 112.81 No other positions
QTw.StMo-3H qtl 84.89 No other positions
QKp.StMo-3H qtl 84.89 No other positions
QGpc.StMo-3H.1 qtl 84.89 No other positions
QFcd.HaTR-3H qtl 35.12 No other positions
QBgnm.HaTR-3H.1 qtl 35.12 No other positions
QBgnm.StMo-3H qtl 35.12 No other positions
bPb-7120 locus 206.91 No other positions
bPb-3295 locus 206.91 No other positions
bPb-7413 locus 182.77 No other positions
bPb-4757 locus 70.63 No other positions
bPb-6491 locus 65.12 No other positions
bPb-8666 locus 62.95 No other positions
bPb-4407 locus 55.32 No other positions
[221563] locus 208.01 No other positions
[223314] locus 206.91 No other positions
[221662] locus 206.91 No other positions
[221492] locus 206.91 No other positions
[221355] locus 206.91 No other positions
[222593] locus 199.27 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.