*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OWB, OPA2008
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OWB-OPA2008-6H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OWB, OPA2008 [ View Map Set Info ]
Map Name: Hordeum-OWB-OPA2008-6H
Map Start: 0
Map Stop: 160.83
Features by Type:
340 locus
12 qtl
352 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 352.       Previous | of 15 | Next
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
[221710] locus 55.44 No other positions
[220812] locus 49.86 No other positions
[223386] locus 48.77 No other positions
[221169] locus 48.77 No other positions
[223808] locus 40.03 No other positions
[220998] locus 40.03 No other positions
[222286] locus 37.83 No other positions
[221152] locus 37.83 No other positions
[223374] locus 31.16 No other positions
[223325] locus 31.16 No other positions
[224154] locus 25.58 No other positions
[222316] locus 20.04 No other positions
[222053] locus 20.04 No other positions
[221961] locus 20.04 No other positions
[223070] locus 5.46 No other positions
[221458] locus 5.46 No other positions
[223456] locus 2.2 No other positions
[222141] locus 2.2 No other positions
[223608] locus 0 No other positions
DsT-74 locus 153.19 Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-6H DsT-74 locus 160.5 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H DsT-74 locus 132 () Automated name-based View Maps
DsT-28 locus 151.01 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H DsT-28 locus 126.4 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-6H DsT-28 locus 152.8 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-6H DsT-28 locus 159.1 () Automated name-based View Maps
DsT-32B locus 139.59 Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-6H DsT-32B locus 145.9 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H DsT-32B locus 114.5 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-6H DsT-32B locus 139.2 () Automated name-based View Maps
scind04312b locus 124.98 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-6H scind04312b locus 118.53 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-6H scind04312b locus 131.6 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-6 scind04312b locus 118.53 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-6H scind04312b locus 133.93 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H scind04312b locus 104.3 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-6H scind04312b locus 118.53 () Automated name-based View Maps
scsnp21226 locus 93.06 Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-6H scsnp21226 locus 99.56 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-6H scsnp21226 locus 93.18 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H scsnp21226 locus 74.8 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-6H scsnp21226 locus 93.18 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-6 scsnp21226 locus 93.18 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-6H scsnp21226 locus 98.5 () Automated name-based View Maps
scssr02093 locus 67.42 Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-6H scssr02093 locus 70.32 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H scssr02093 locus 61.4 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-6H scssr02093 locus 67.2 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-6H scssr02093 locus 72.68 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-6 scssr02093 locus 70.32 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-6H scssr02093 locus 70.9 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-6H scssr02093 locus 70.32 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.