*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OWB, OPA2008
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OWB-OPA2008-6H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)




Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OWB, OPA2008 [ View Map Set Info ]
Map Name: Hordeum-OWB-OPA2008-6H
Map Start: 0.00
Map Stop: 160.83
Features by Type:
340 locus
12 qtl
352 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 352.       of 15 | Next
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-6H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
QTw.HaTR-6H qtl 119.50 No other positions
QTw.BlE2-6H.2 qtl 106.23 No other positions
QEv.HaTR-6H qtl 106.23 No other positions
QDp.HaTR-6H qtl 106.23 No other positions
QAa.HaTR-6H qtl 106.23 No other positions
QAa.ChHa-6H qtl 106.23 No other positions
QDp.StMo-6H qtl 86.39 No other positions
QTw.BlKy-6H qtl 67.42 No other positions
QAa.StMo-6H qtl 67.42 No other positions
QTw.HaMo-6H.1 qtl 30.07 No other positions
QFcd.HaTR-6H qtl 30.07 No other positions
QMe.StMo-6H qtl 3.29 No other positions
bPb-9413 locus 149.93 No other positions
bPb-5587 locus 137.40 No other positions
bPb-9479 locus 75.28 No other positions
bPb-5517 locus 75.28 No other positions
bPb-4229 locus 75.28 No other positions
bPb-8275 locus 5.46 No other positions
bPb-6511 locus 5.46 No other positions
[220848] locus 160.83 No other positions
[223186] locus 158.65 No other positions
[222800] locus 158.65 No other positions
[221088] locus 137.40 No other positions
[221063] locus 137.40 No other positions
[221783] locus 119.50 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.