*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OWB, OPA2008
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-OWB-OPA2008-7H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
qtl
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OWB, OPA2008 [ View Map Set Info ]
Map Name: Hordeum-OWB-OPA2008-7H
Map Start: 0
Map Stop: 197.59
Features by Type:
341 locus
22 qtl
363 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 51 to 75 of 363.       Previous | of 15 | Next
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-7H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
[221832] locus 31.84 No other positions
[222485] locus 25.16 No other positions
[222301] locus 11.97 No other positions
[223056] locus 9.8 No other positions
[221786] locus 9.8 No other positions
[224158] locus 6.52 No other positions
[222156] locus 6.52 No other positions
[221346] locus 6.52 No other positions
[221162] locus 6.52 No other positions
[223392] locus 3.25 No other positions
[223152] locus 3.25 No other positions
Tha1 locus 197.59 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 Tha1 locus 153.5 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H Tha1 locus 153.5 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H Tha1 locus 153.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H Tha1 locus 151.6 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-7H Tha1 locus 175.6 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H Tha1 locus 151.6 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-7H Tha1 locus 185.48 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H Tha1 locus 151.2 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-7H Tha1 locus 139.58 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H Tha1 locus 199.5 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-7H Tha1 locus 187.9 () Automated name-based View Maps
GBM1065 locus 171.52 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H GBM1065 locus 132.8 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-7H GBM1065 locus 165.5 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-7H GBM1065 locus 135.11 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H GBM1065 locus 177.5 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-7H GBM1065-7H locus 128.6 () Automated name-based View Maps
bPb-6186 locus 134.53 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H bPb-6186 locus 105.7 () Automated name-based View Maps
Barley - Barley, Nure x Tremois - Hv-Nure/Tremois-7H bPb-6186 locus 96.6 () Automated name-based View Maps
DsT-30 locus 121.16 Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-7H DsT-30 locus 120.1 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H DsT-30 locus 98.6 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H DsT-30 locus 125.7 () Automated name-based View Maps
ABC1024 locus 112.44 Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H ABC1024 locus 117.2 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H ABC1024 locus 94.4 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-7H ABC1024 locus 112 () Automated name-based View Maps
scsnp00703 locus 89.56 Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 scsnp00703 locus 99.91 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H scsnp00703 locus 99.91 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-7H scsnp00703 locus 85.62 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H scsnp00703 locus 86.7 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H scsnp00703 locus 99.91 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H scsnp00703 locus 96.7 () Automated name-based View Maps
scsnp00460 locus 60.88 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H scsnp00460 locus 62.7 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 scsnp00460 locus 74.96 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-7H scsnp00460 locus 53.65 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H scsnp00460 locus 74.96 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H scsnp00460 locus 66.3 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H scsnp00460 locus 74.96 () Automated name-based View Maps
AW982580 locus 22.97 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H AW982580 locus 30.3 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H AW982580 locus 29.1 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-7H AW982580 locus 30.5 () Automated name-based View Maps
KFP255 locus 195.39 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H KFP255 locus 149 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-7H KFP255 locus 140 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-7H KFP255 locus 185.7 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H KFP255 locus 197.3 () Automated name-based View Maps
DAK642 locus 80.66 Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-7H DAK642 locus 78.22 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H DAK642 locus 88.9 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-7H DAK642 locus 89.06 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-7H DAK642 locus 84.1 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-7H DAK642 locus 77.1 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-7H DAK642 locus 89.06 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-7H DAK642 locus 81.27 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-7H DAK642 locus 82 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-7 DAK642 locus 89.06 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-7H DAK642 locus 75.38 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-7H DAK642 locus 68.2 () Automated name-based View Maps
ABC165D locus 61.97 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-6H ABC165D locus 75.9 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-7H ABC165D locus 68.9 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-7H ABC165D locus 65.2 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-6H ABC165D locus 83 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-6H ABC165D locus 75.61 () Automated name-based View Maps
POPA3_1489 locus 170.43 Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA3_1489 locus 153.16 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA3_1489 locus 150.58 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_7H POPA3_1489 locus 157.86 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-7H POPA3_1489 locus 150.58 () Automated name-based View Maps
POPA3_1483 locus 139.03 Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-7H POPA3_1483 locus 125.17 () Automated name-based View Maps
Barley - Barley, USDA Core, 2014 Consensus - Barley-Core-2014_7H POPA3_1483 locus 122.6 () Automated name-based View Maps
Barley - Barley, OPA 2011, Consensus - Hordeum-OPAConsensus-2011-7H POPA3_1483 locus 121.36 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA3_1483 locus 125.17 () Automated name-based View Maps
POPA3_0031 locus 64.14 Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-7H POPA3_0031 locus 68.46 () Automated name-based View Maps
Barley - Barley, OPA123-2008, Consensus - Hordeum-OPA123-2008-7H POPA3_0031 locus 68.46 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.