*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, OWB, Stein2006
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hv-DxR-Stein-4H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OWB, Stein2006 [ View Map Set Info ]
Map Name: Hv-DxR-Stein-4H
Map Start: 0
Map Stop: 130.49
Features by Type:
85 locus
85 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 25 of 85.       of 4 | Next
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-4H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
ABC303-4H locus 44.02 Barley - Barley, OWB - Hordeum-OWB-4H ABC303 locus 42.9 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-4H ABC303 locus 39.5 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H ABC303 locus 43.4 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-4H ABC303 locus 46.7 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H ABC303 locus 44.38 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H ABC303 locus 60.2 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-4H ABC303 locus -7 () Automated name-based View Maps
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-4H ABC303 locus 63.9 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-4H ABC303 locus 40.8 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-4H ABC303 locus 55.1 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-4H ABC303 locus 55.1 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H ABC303 locus 44.38 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-4H ABC303 locus 61.2 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H ABC303 locus 50.3 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-4H ABC303 locus 50.3 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-4H ABC303-4H locus 52.48 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 ABC303 locus 44.38 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-4H ABC303 locus 78.7 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-4H ABC303 locus 49.2 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-4H ABC303 locus 43.61 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-4H ABC303 locus 48.4 () Automated name-based View Maps
ABG472-4H locus 84.61 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-4H ABG472-4H locus 81.35 () Automated name-based View Maps
Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-4H ABG472-4H locus 78.26 () Automated name-based View Maps
Bmac186-4H locus 65.62 No other positions
CDO542-4H locus 33.57 Oat - Oat-2002-KxO_Pal - Oat-2002-KxO-Pal_22 CDO542 locus 97.46 (cM) Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-4H CDO542 locus 28.36 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-4H CDO542 locus 31.2 () Automated name-based View Maps
Oat - Oat, KxO, 2003 - Oat-KxO/2003-22_44+18 CDO542 locus 120 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-4H CDO542 locus 42.2 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-4H CDO542 locus 21 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-4H CDO542 locus 32.46 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-4H CDO542 locus 28.36 () Automated name-based View Maps
Rice - Rice, BxOl - Rice-CU-3 CDO542 locus 102.2 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-4H CDO542 locus 31.38 () Automated name-based View Maps
Oat - Oat-2016-KxO - Oat-2016-KxO_1 CDO542 locus 155 () Automated name-based View Maps
Oat - Oat-2016-Consensus - Oat-2016-Consensus-20 CDO542 locus 111.4 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-4 CDO542 locus 28.36 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-4H CDO542 locus 31.76 () Automated name-based View Maps
Oat - Oat-2018-Consensus - Oat-2018-Consensus_Mrg20 CDO542 locus 111.4 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-4H CDO542 locus 28.7 () Automated name-based View Maps
Oat - Oat-2009-KxO - Oat-2009-KxO_22_44_18 CDO542 locus 114 (cM) Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-4H CDO542 locus 29.6 () Automated name-based View Maps
Oat - Oat-2001-KxO - Oat-2001-KxO_22 CDO542 locus 53.75 (cM) Automated name-based View Maps
Dhn6-4H locus 41.82 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-4H Dhn6-4H locus 63 () Automated name-based View Maps
HVM03-4H locus 54.64 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-4H HVM03-4H locus 61.75 () Automated name-based View Maps
HVM67-4H locus 119.57 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-4H HVM67-4H locus 137.81 () Automated name-based View Maps
MWG077-4H locus 23.7 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-4H MWG077-4H locus 16.81 () Automated name-based View Maps
MWG634-4H locus 3.31 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-4H MWG634-4H locus 0 () Automated name-based View Maps
GBM1221-4H locus 16.32 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-4H GBM1221-4H locus 12.83 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBM1221-4H locus 16.1 () Automated name-based View Maps
GBS0434-4H locus 54.92 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-4H GBS0434-4H locus 55.49 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBS0434-4H locus 54.5 () Automated name-based View Maps
GBS0506-4H locus 56.85 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-4H GBS0506-4H locus 60.52 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBS0506-4H locus 57.3 () Automated name-based View Maps
cMWG652b-4H locus 101.19 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-4H cMWG652b-4H locus 98.59 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H cMWG652b-4H locus 99 () Automated name-based View Maps
GBM1501-4H locus 0 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBM1501-4H locus 0 () Automated name-based View Maps
GBM1107-4H locus 11.89 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBM1107-4H locus 12 () Automated name-based View Maps
GBS0372-4H locus 16.51 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBS0372-4H locus 16.6 () Automated name-based View Maps
GBM1465-4H locus 22.4 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBM1465-4H locus 22.9 () Automated name-based View Maps
GBM1525-4H locus 22.5 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBM1525-4H locus 23.1 () Automated name-based View Maps
GBS0349-4H locus 23.27 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBS0349-4H locus 23.8 () Automated name-based View Maps
GBM1055-4H locus 23.39 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBM1055-4H locus 23.5 () Automated name-based View Maps
GBR0414-4H locus 25.69 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBR0414-4H locus 25.9 () Automated name-based View Maps
GBS0551-4H locus 25.72 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBS0551-4H locus 25.9 () Automated name-based View Maps
GBM1323-4H locus 31.21 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBM1323-4H locus 31.5 () Automated name-based View Maps
GBS0757-4H locus 31.47 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBS0757-4H locus 31.8 () Automated name-based View Maps
GBR1170-4H locus 32.03 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-4H GBR1170-4H locus 32.4 () Automated name-based View Maps

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.