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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Barley-Barley, OWB, Stein2006
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, OWB, Stein2006 [ View Map Set Info ]
Map Name: Hv-DxR-Stein-5H
Map Start: 0
Map Stop: 222.34
Features by Type:
114 locus
114 Total

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Items 1 to 25 of 114.       of 5 | Next
Barley - Barley, OWB, Stein2006 - Hv-DxR-Stein-5H
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Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
ABC302-5H locus 87.79 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H ABC302-5H locus 61.28 () Automated name-based View Maps
Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-5H ABC302-5H locus 13.22 () Automated name-based View Maps
ABC483-5H locus 21.7 Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H ABC483 locus 11.4 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H ABC483-5H locus 5.72 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-5H ABC483 locus 6.7 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-5H ABC483 locus 7.1 () Automated name-based View Maps
Barley - Barley, HxT basemap - Hordeum-HxT-base-5H ABC483 locus 18.3 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-5H ABC483 locus 11.3 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-5H ABC483 locus 7.8 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-5H ABC483 locus 1.21 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H ABC483 locus 6 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-5H ABC483 locus 7.7 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-5H ABC483 locus 3.6 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-5H ABC483 locus 43.05 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H ABC483 locus 25.81 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-5H ABC483 locus 16.8 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-5H ABC483 locus 7.1 () Automated name-based View Maps
Barley - Barley, GxH - Hordeum-GxH-5H ABC483 locus 36.75 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-5H ABC483 locus -45.1 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-5 ABC483 locus 7.1 () Automated name-based View Maps
Barley - Barley, HxT - Hordeum-NABGMP2-5H ABC483 locus 13.9 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H ABC483 locus 11.2 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-5H ABC483 locus 13.84 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-5H ABC483 locus 6.9 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-5H ABC483 locus 5.5 () Automated name-based View Maps
ABG003b-5H locus 142.45 No other positions
ABG391-5H locus 198.41 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-5H ABG391-5H locus 137.48 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H ABG391-5H locus 131.33 () Automated name-based View Maps
ABG395-5H locus 46.39 Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-5H ABG395 locus 37 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-5H ABG395 locus 16.89 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-5H ABG395 locus -9.2 () Automated name-based View Maps
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-5H ABG395 locus 37.5 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-5H ABG395 locus 49.8 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-5H ABG395 locus 45.6 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H ABG395 locus 40.3 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-5H ABG395 locus 63.87 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-5 ABG395 locus 43.95 () Automated name-based View Maps
Barley - Barley, SxM basemap - Hordeum-SxM-base-5H ABG395 locus 46.7 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-5H ABG395 locus 30.9 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-5H ABG395 locus 46.2 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H ABG395 locus 49.27 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H ABG395 locus 38.72 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-5H ABG395 locus 42.32 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-5H ABG395 locus 43.95 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-5H ABG395 locus 45.6 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-5H ABG395 locus 51 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-5H ABG395 locus 29 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSAP - Hordeum-SxM-SSAP-5H ABG395 locus 47.6 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H ABG395-5H locus 35.55 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H ABG395 locus 38.72 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-5H ABG395 locus 43.95 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H ABG395 locus 40.7 () Automated name-based View Maps
ABG496-5H locus 179.14 Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-5H ABG496 locus 156.8 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-5H ABG496 locus 163.6 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-5H ABG496 locus 161.8 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-5H ABG496 locus 87 () Automated name-based View Maps
Barley - Barley, Consensus 2007, SSR - Hordeum-Consensus2007-SSR-5H ABG496 locus 143.61 () Automated name-based View Maps
Barley - Barley, Zhedar2, FHB QTL - Hordeum-Zhedar2-FHB-QTL-5H ABG496 locus 153.4 () Automated name-based View Maps
Barley - Barley, SxM, Feed QTLs - Hordeum-SxM-FeedQTL-5H ABG496 locus 166.6 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-5H ABG496 locus 179.2 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-5H ABG496 locus 159.2 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-5H ABG496 locus 158.23 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SSR - Hordeum-SxM-SSR-5H ABG496 locus 181.1 () Automated name-based View Maps
Barley - Barley, FxS, FHB QTL - Hordeum-FxS-FHB-QTL-5H ABG496 locus 212.7 () Automated name-based View Maps
Barley - Barley, Steptoe x Morex, SNP - Hordeum-StMo-SNP-5H ABG496 locus 148.52 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H ABG496 locus 143.61 () Automated name-based View Maps
Barley - Barley, Consensus 2006, DArT - Hordeum-Consensus2006-DArT-5H ABG496 locus 155.3 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-5 ABG496 locus 158.23 () Automated name-based View Maps
Barley - Barley, SxM - Hordeum-NABGMP1-5H ABG496 locus 166.6 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H ABG496-5H locus 122.68 () Automated name-based View Maps
Barley - Barley, OPA 2009, Consensus - Hordeum-OPA-2009-5H ABG496 locus 244.39 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H ABG496 locus 192.87 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-5H ABG496 locus 135.74 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-5H ABG496 locus 173.3 () Automated name-based View Maps
Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H ABG496 locus 141 () Automated name-based View Maps
Barley - Barley consensus 2003 - Barley-consensus-2003-5H ABG496 locus 68.1 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-5H ABG496 locus 158.23 () Automated name-based View Maps
Barley - Barley, KxM - Hordeum-KxM-5H ABG496 locus 202.2 () Automated name-based View Maps
Bmag222-5H locus 180.12 No other positions
MWG522-5H locus 106.07 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-5H MWG522-5H locus 29.37 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H MWG522-5H locus 83.29 () Automated name-based View Maps
MWG602a-5H locus 221 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-5H MWG602a-5H locus 167.64 () Automated name-based View Maps
MWG618-5H locus 16.72 Barley - Barley, Integrated, Marcel 2009 - Hv-Integrated2009-5H MWG618 locus 12.2 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-5H MWG618 locus 4 () Automated name-based View Maps
Barley - Barley, Consensus 2005, SNP - Hordeum-Consensus2005-SNP-5H MWG618 locus 8.73 () Automated name-based View Maps
Barley - Barley, Agronomic QTL Consensus - Hordeum-QTLConsensus-Agronomic-5 MWG618 locus 8.73 () Automated name-based View Maps
Barley - Barley, OWB, OPA2008 - Hordeum-OWB-OPA2008-5H MWG618 locus 21.43 () Automated name-based View Maps
Barley - Barley, OWB, SNP - Hordeum-OWB-SNP-5H MWG618 locus 48.09 () Automated name-based View Maps
Barley - Barley, IxF - Hordeum-Graner2-5H MWG618 locus 9.9 () Automated name-based View Maps
Barley - Barley, physical - Hordeum-Physical-RFLP-5H MWG618 locus 9.9 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Marcel - Hv-Consensus2006-Marcel-5H MWG618 locus 8.55 () Automated name-based View Maps
Barley - Barley, OWB, 2004 - Hordeum-OWB-2004-5H MWG618 locus 3.3 () Automated name-based View Maps
Barley - Barley, L94 x Vada, 2006 - Hv-L94/Vada-2006-5H MWG618 locus 5.46 () Automated name-based View Maps
Barley - Barley, Abiotic QTL Consensus - Hordeum-QTLConsensus-Abiotic-5H MWG618 locus 8.73 () Automated name-based View Maps
Barley - Barley, OWB - Hordeum-OWB-5H MWG618 locus 0 () Automated name-based View Maps
Barley - Barley, OWB, 2005 - Hordeum-OWB-2005-5H MWG618 locus 6.2 () Automated name-based View Maps
Barley - Barley consensus 2 - Barley-Consensus2-5H MWG618 locus 22.8 () Automated name-based View Maps
MWG877-5H locus 167.41 Barley - Barley, IxF, Stein2006 - Hv-IxF-Stein-5H MWG877-5H locus 115.01 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H MWG877-5H locus 113.59 () Automated name-based View Maps
GBR0232-5H locus 0 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H GBR0232-5H locus 1.09 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0232-5H locus 2.5 () Automated name-based View Maps
GBR0528-5H locus 94.01 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H GBR0528-5H locus 66.09 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0528-5H locus 79.3 () Automated name-based View Maps
GBR0086b-5H locus 206.41 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0086b-5H locus 179.4 () Automated name-based View Maps
Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H GBR0086b-5H locus 136.33 () Automated name-based View Maps
GBR0987-5H locus 222.13 Barley - Barley, SxM, Stein2006 - Hv-SxM-Stein-5H GBR0987-5H locus 153.79 () Automated name-based View Maps
Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0987-5H locus 195.7 () Automated name-based View Maps
GBR1680-5H locus 0.05 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR1680-5H locus 0 () Automated name-based View Maps
GBR0210-5H locus 0.12 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0210-5H locus 0 () Automated name-based View Maps
GBR0233-5H locus 0.15 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0233-5H locus 0 () Automated name-based View Maps
GBM1176-5H locus 31.06 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1176-5H locus 22.3 () Automated name-based View Maps
GBR1565-5H locus 32.23 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR1565-5H locus 23.4 () Automated name-based View Maps
GBM1173-5H locus 32.27 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBM1173-5H locus 23.4 () Automated name-based View Maps
GBS0086-5H locus 34.57 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBS0086-5H locus 25.7 () Automated name-based View Maps
GBR0725-5H locus 47.51 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0725-5H locus 37.9 () Automated name-based View Maps
GBR0105-5H locus 54.55 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBR0105-5H locus 45 () Automated name-based View Maps
GBS0898-5H locus 54.62 Barley - Barley, Consensus 2006, Stein - Hv-Consensus2006-Stein-5H GBS0898-5H locus 45 () Automated name-based View Maps

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