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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Pilot OPA1, Consensus
(Reference Set)
Barley-Barley, HxT
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-PilotOPA1-2H Hordeum-NABGMP2-2H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Pilot OPA1, Consensus [ View Map Set Info ]
Map Name: Hordeum-PilotOPA1-2H
Map Start: 0.00
Map Stop: 165.28
Features by Type:
234 locus
234 Total

Map Features

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Items 26 to 50 of 234.       Previous | of 10 | Next
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-2H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
OPAp1_0701 locus 15.96 No other positions
OPAp1_0592 locus 17.49 No other positions
OPAp1_0502 locus 18.26 No other positions
OPAp1_1119 locus 18.26 No other positions
OPAp1_0096 locus 19.02 No other positions
OPAp1_1319a locus 20.55 No other positions
OPAp1_1040 locus 23.54 No other positions
OPAp1_0943 locus 24.25 No other positions
OPAp1_0180 locus 29.16 No other positions
OPAp1_0777 locus 29.16 No other positions
OPAp1_0307 locus 42.26 No other positions
OPAp1_0660 locus 42.52 No other positions
OPAp1_0891 locus 42.52 No other positions
OPAp1_0987 locus 43.31 No other positions
OPAp1_0787 locus 43.35 No other positions
OPAp1_1110 locus 44.19 No other positions
OPAp1_1452 locus 44.94 No other positions
OPAp1_1304 locus 46.12 No other positions
OPAp1_0847 locus 46.26 No other positions
OPAp1_1390 locus 49.45 No other positions
OPAp1_0525 locus 49.60 No other positions
OPAp1_0412 locus 49.60 No other positions
OPAp1_1057 locus 49.60 No other positions
OPAp1_0178 locus 49.60 No other positions
OPAp1_1073 locus 49.78 No other positions

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