*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Pilot OPA1, Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-PilotOPA1-3H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Pilot OPA1, Consensus [ View Map Set Info ]
Map Name: Hordeum-PilotOPA1-3H
Map Start: 0
Map Stop: 168.33
Features by Type:
201 locus
201 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 26 to 50 of 201.       Previous | of 9 | Next
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-3H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
OPAp1_1005 locus 9.01 No other positions
OPAp1_0886 locus 11.84 No other positions
OPAp1_0112 locus 11.85 No other positions
OPAp1_0059b locus 12.39 No other positions
OPAp1_1310 locus 12.55 No other positions
OPAp1_0908 locus 12.92 No other positions
OPAp1_0571 locus 15 No other positions
OPAp1_1013 locus 17.55 No other positions
OPAp1_0832 locus 17.95 No other positions
OPAp1_0384 locus 19.05 No other positions
OPAp1_0565 locus 20.38 No other positions
OPAp1_0087 locus 21.31 No other positions
OPAp1_0559 locus 26.12 No other positions
OPAp1_0691 locus 26.99 No other positions
OPAp1_1308 locus 29.24 No other positions
OPAp1_1237 locus 30.64 No other positions
OPAp1_0519 locus 34.17 No other positions
OPAp1_1212 locus 34.17 No other positions
OPAp1_1527 locus 34.17 No other positions
OPAp1_0026 locus 35.08 No other positions
OPAp1_0643 locus 36.1 No other positions
OPAp1_1414 locus 36.1 No other positions
OPAp1_0277 locus 39.71 No other positions
OPAp1_0672 locus 40.77 No other positions
OPAp1_0852 locus 40.77 No other positions

CMap is free software from the GMOD project

  Contact the GrainGenes Curators

GrainGenes is a product of the US Department of Agriculture.