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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Pilot OPA1, Consensus
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-PilotOPA1-4H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Pilot OPA1, Consensus [ View Map Set Info ]
Map Name: Hordeum-PilotOPA1-4H
Map Start: 0
Map Stop: 138.3
Features by Type:
148 locus
148 Total

Map Features

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Items 26 to 50 of 148.       Previous | of 6 | Next
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-4H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
OPAp1_0223 locus 22.92 No other positions
OPAp1_0574 locus 22.92 No other positions
OPAp1_0221 locus 23.9 No other positions
OPAp1_1199 locus 24.72 No other positions
OPAp1_1136 locus 25.07 No other positions
OPAp1_0562 locus 28.02 No other positions
OPAp1_1060 locus 28.34 No other positions
OPAp1_0626 locus 28.34 No other positions
OPAp1_1175 locus 28.34 No other positions
OPAp1_0031 locus 31.02 No other positions
OPAp1_0132 locus 32.3 No other positions
OPAp1_0395 locus 32.3 No other positions
OPAp1_0810 locus 35.65 No other positions
OPAp1_1218 locus 35.65 No other positions
OPAp1_0171 locus 38.05 No other positions
OPAp1_0347 locus 38.05 No other positions
OPAp1_0860 locus 38.72 No other positions
OPAp1_1382 locus 42.76 No other positions
OPAp1_0063 locus 42.9 No other positions
OPAp1_0371 locus 43.1 No other positions
OPAp1_0108 locus 43.1 No other positions
OPAp1_0048 locus 43.56 No other positions
OPAp1_0668 locus 44.59 No other positions
OPAp1_0793 locus 44.59 No other positions
OPAp1_1180 locus 45.78 No other positions

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