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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Pilot OPA1, Consensus
(Reference Set)
Barley-Barley, BinMap 2005
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-PilotOPA1-6H Hordeum-Bins-6H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
bin
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Pilot OPA1, Consensus [ View Map Set Info ]
Map Name: Hordeum-PilotOPA1-6H
Map Start: 0.00
Map Stop: 137.60
Features by Type:
147 locus
147 Total

Map Features

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Items 26 to 50 of 147.       Previous | of 6 | Next
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-6H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
OPAp1_0165 locus 21.25 No other positions
OPAp1_0064 locus 23.05 No other positions
OPAp1_0023 locus 24.39 No other positions
OPAp1_1210 locus 24.53 No other positions
OPAp1_0065b locus 30.76 No other positions
OPAp1_0136 locus 30.76 No other positions
OPAp1_0868 locus 30.76 No other positions
OPAp1_0774 locus 34.63 Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-7H OPAp1_0774 locus 24.17 () Automated name-based View Maps
OPAp1_0676 locus 36.00 No other positions
OPAp1_0994 locus 39.87 No other positions
OPAp1_0799 locus 39.87 No other positions
OPAp1_0939 locus 41.57 No other positions
OPAp1_0427 locus 42.45 No other positions
OPAp1_0866 locus 51.56 No other positions
OPAp1_1455 locus 51.71 No other positions
OPAp1_0061 locus 51.71 No other positions
OPAp1_0129 locus 52.68 No other positions
OPAp1_0494 locus 52.93 No other positions
OPAp1_0882 locus 52.93 No other positions
OPAp1_0244 locus 54.38 No other positions
OPAp1_0199 locus 54.81 No other positions
OPAp1_0575 locus 54.81 No other positions
OPAp1_0644 locus 54.81 No other positions
OPAp1_0811 locus 54.81 No other positions
OPAp1_0910 locus 54.81 No other positions

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