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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, Pilot OPA1, Consensus
(Reference Set)
Barley-Barley, BinMap 2005
Min.
Correspondences
Align Vertically
Stack
Maps Hordeum-PilotOPA1-7H Hordeum-Bins-7H
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
bin
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, Pilot OPA1, Consensus [ View Map Set Info ]
Map Name: Hordeum-PilotOPA1-7H
Map Start: 0.00
Map Stop: 148.29
Features by Type:
167 locus
167 Total

Map Features

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Items 26 to 50 of 167.       Previous | of 7 | Next
Barley - Barley, Pilot OPA1, Consensus - Hordeum-PilotOPA1-7H
(Click headers to resort)
Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
OPAp1_0894 locus 1.08 No other positions
OPAp1_0375 locus 2.52 No other positions
OPAp1_1179 locus 4.21 No other positions
OPAp1_0517 locus 4.94 No other positions
OPAp1_1031 locus 5.00 No other positions
OPAp1_0928 locus 6.23 No other positions
OPAp1_1495 locus 6.23 No other positions
OPAp1_1433 locus 7.04 No other positions
OPAp1_0406 locus 7.04 No other positions
OPAp1_1035 locus 7.50 No other positions
OPAp1_0841 locus 11.38 No other positions
OPAp1_0851 locus 12.67 No other positions
OPAp1_1052 locus 16.42 No other positions
OPAp1_1396 locus 23.21 No other positions
OPAp1_0965 locus 25.61 No other positions
OPAp1_1451 locus 27.36 No other positions
OPAp1_0451 locus 28.43 No other positions
OPAp1_0075 locus 28.53 No other positions
OPAp1_0232 locus 29.19 No other positions
OPAp1_0800 locus 32.01 No other positions
OPAp1_1068 locus 32.03 No other positions
OPAp1_0218 locus 34.28 No other positions
OPAp1_0838 locus 34.89 No other positions
OPAp1_1197 locus 35.19 No other positions
OPAp1_0056 locus 36.33 No other positions

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