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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Barley-Barley, PxN
(Reference Set)
Min.
Correspondences
Align Vertically
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Maps Hordeum-Heun-1H
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hint: To save time, select the desired options before redrawing the map.
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 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
locus
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
BLASTN
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Genetic [ View Map Type Info ]
Map Set Name: Barley - Barley, PxN [ View Map Set Info ]
Map Name: Hordeum-Heun-1H
Map Start: 0
Map Stop: 189
Features by Type:
30 locus
30 Total

Map Features

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Items 26 to 30 of 30.       Previous | of 2
Barley - Barley, PxN - Hordeum-Heun-1H
(Click headers to resort)		 Comparative Maps
Feature Type Position () Map Feature Type Position Evidence Actions
E37/M32/3 locus 150.1 No other positions
E42/M38/9 locus 154.6 No other positions
Xcnl.CDO393 locus 189 Barley - Barley consensus 2003 - Barley-consensus-2003-1H CDO393 locus 118.7 () Automated name-based View Maps
Wheat ABD - Wheat, Yr genes and QTL - Wheat, Yr genes and QTL 1A cdo393 locus 86 () Automated name-based View Maps
Barley - Barley consensus - Barley-Consensus-1H CDO393 locus 97.1 () Automated name-based View Maps
Oat - Oat, MxN, genetic 2005 - Oat-MxN_2005-18 CDO393 locus 17.6 () Automated name-based View Maps
Barley - Barley, CxH - Hordeum-CxH-1H CDO393 locus 183.15 () Automated name-based View Maps
Barley - Barley, BinMap 2005 - Hordeum-Bins-1H CDO393 locus 154 () Automated name-based View Maps
Diploid oat - Oat-2006-LAG211 - Oat-2006-LAG211_10 cdo393 locus 0 () Automated name-based View Maps
Xksu.DGE11 locus 189 No other positions
Xcnl.WG241 locus 189 No other positions

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